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AT5G64880.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plasma membrane 0.900
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JM81eggNOG:ENOG4111CUEEMBL:AB019236EMBL:AK229074
EMBL:CP002688EnsemblPlants:AT5G64880EnsemblPlants:AT5G64880.1entrez:836611
GeneID:836611GO:GO:0016021Gramene:AT5G64880.1hmmpanther:PTHR35771
hmmpanther:PTHR35771:SF1KEGG:ath:AT5G64880OMA:NPIPISHPhylomeDB:Q9LV89
Proteomes:UP000006548RefSeq:NP_568999.1TAIR:AT5G64880TMHMM:TMhelix
UniGene:At.27520UniProt:Q9LV89
Coordinates (TAIR10) chr5:+:25932353..25933874
Molecular Weight (calculated) 18779.30 Da
IEP (calculated) 5.91
GRAVY (calculated) -0.04
Length 171 amino acids
Sequence (TAIR10)
(BLAST)
001: MVDSGKEFLV LDSYNNIPWL IWIQMLVFVL LLLLLCVIGI FSFDIVDNSY SSSDSVPSTS GSSLSKRFLS GNPIPISHHG LGFSVNSSLV QSHQVGSSQS
101: IKGEITPAVT RRVTTVTEEG EGSLEKDSSH SLHHPCTLFR LAGSAFLKCF GIDRSTEETE DSLRQESKKE R
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)