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AT5G64780.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Uncharacterised conserved protein UCP009193
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Uncharacterised conserved protein UCP009193; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP009193 (InterPro:IPR016549); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP009193 (TAIR:AT4G09830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
DNASU:836599eggNOG:ENOG410JX4AeggNOG:ENOG41104B6EMBL:AB025637EMBL:AK226926EMBL:AY074385EMBL:AY091256
EMBL:CP002688EnsemblPlants:AT5G64780EnsemblPlants:AT5G64780.1entrez:836599GeneID:836599Gramene:AT5G64780.1hmmpanther:PTHR33675
hmmpanther:PTHR33675:SF3IntAct:Q9FGF5InterPro:IPR016549KEGG:ath:AT5G64780OMA:QLYTHAMPhylomeDB:Q9FGF5PIRSF:PIRSF009193
Proteomes:UP000006548RefSeq:NP_201283.1STRING:3702.AT5G64780.1TAIR:AT5G64780UniGene:At.28940UniProt:Q9FGF5
Coordinates (TAIR10) chr5:-:25900700..25901955
Molecular Weight (calculated) 19992.20 Da
IEP (calculated) 6.39
GRAVY (calculated) -0.84
Length 175 amino acids
Sequence (TAIR10)
(BLAST)
001: MGKKRKSEAT RLDEVDRTMY GAFRGAANSL SQLYTHAMNH QRVSFLAGER RGMEKLYQWI VRQEEQGTRV STADITTYLQ NALEYEPEET SIPLPMQEFY
101: QHQFAPPNVN TSVAHVPSSH IAQQQHYDCN QEKLLIPPNG LSSPVRRTLQ DFNLCEAESG NNNYNPNSTG EHLSY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)