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AT5G64740.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:21826108 (2012): Golgi trans-Golgi network multivesicular body
  • PMID:21433285 (2011): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : cellulose synthase 6
Curator
Summary (TAIR10)
Encodes a cellulose synthase isomer. CESA6 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA6, along with CESA1 and CESA3 are present in the same plasma membrane complex for cellulose biosynthesis. CESA2 and CESA5 are related to CESA6, having partially redundant roles. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.
Computational
Description (TAIR10)
cellulose synthase 6 (CESA6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: in 6 processes; LOCATED IN: cortical microtubule, transverse to long axis, Golgi apparatus, cellulose synthase complex, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 5 (TAIR:AT5G09870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
EC:2.4.1.12eggNOG:COG1215eggNOG:ENOG410IER8EMBL:KJ676983EnsemblPlants:AT5G64740EnsemblPlants:AT5G64740.1entrez:836595
ExpressionAtlas:A0A068FJJ5Gene3D:3.30.40.10GeneID:836595GO:GO:0005886GO:GO:0008270GO:GO:0016021GO:GO:0016760
GO:GO:0030244GO:GO:0071555Gramene:AT5G64740.1gramene_pathway:2.4.1.12gramene_pathway:PWY-1001hmmpanther:PTHR13301hmmpanther:PTHR13301:SF27
InterPro:IPR001841InterPro:IPR005150InterPro:IPR013083InterPro:IPR027934InterPro:IPR029044KEGG:00500+2.4.1.12KEGG:ath:AT5G64740
KO:K10999ncoils:CoilOMA:VHPMPYTPaxDb:A0A068FJJ5Pfam:PF03552Pfam:PF14569Pfam:Q94JQ6
Pfscan:PS50089PhylomeDB:A0A068FJJ5PROSITE:PS50089ProteinModelPortal:A0A068FJJ5Proteomes:UP000006548RefSeq:NP_201279.1STRING:3702.AT5G64740.1
SUPFAM:SSF53448SUPFAM:SSF57850tair10-symbols:CESA6tair10-symbols:E112tair10-symbols:IXR2tair10-symbols:PRC1TMHMM:TMhelix
UniGene:At.9777UniPathway:UPA00695UniProt:A0A068FJJ5UniProt:Q94JQ6
Coordinates (TAIR10) chr5:+:25881555..25886333
Molecular Weight (calculated) 122509.00 Da
IEP (calculated) 7.42
GRAVY (calculated) -0.20
Length 1084 amino acids
Sequence (TAIR10)
(BLAST)
0001: MNTGGRLIAG SHNRNEFVLI NADENARIRS VQELSGQTCQ ICRDEIELTV DGEPFVACNE CAFPVCRPCY EYERREGNQA CPQCKTRFKR LKGSPRVEGD
0101: EEEDDIDDLD NEFEYGNNGI GFDQVSEGMS ISRRNSGFPQ SDLDSAPPGS QIPLLTYGDE DVEISSDRHA LIVPPSLGGH GNRVHPVSLS DPTVAAHPRP
0201: MVPQKDLAVY GYGSVAWKDR MEEWKRKQNE KLQVVRHEGD PDFEDGDDAD FPMMDEGRQP LSRKIPIKSS KINPYRMLIV LRLVILGLFF HYRILHPVKD
0301: AYALWLISVI CEIWFAVSWV LDQFPKWYPI ERETYLDRLS LRYEKEGKPS GLSPVDVFVS TVDPLKEPPL ITANTVLSIL AVDYPVDKVA CYVSDDGAAM
0401: LTFEALSETA EFARKWVPFC KKYCIEPRAP EWYFCHKMDY LKNKVHPAFV RERRAMKRDY EEFKVKINAL VATAQKVPED GWTMQDGTPW PGNSVRDHPG
0501: MIQVFLGSDG VRDVENNELP RLVYVSREKR PGFDHHKKAG AMNSLIRVSG VLSNAPYLLN VDCDHYINNS KALREAMCFM MDPQSGKKIC YVQFPQRFDG
0601: IDRHDRYSNR NVVFFDINMK GLDGLQGPIY VGTGCVFRRQ ALYGFDAPKK KKGPRKTCNC WPKWCLLCFG SRKNRKAKTV AADKKKKNRE ASKQIHALEN
0701: IEEGRVTKGS NVEQSTEAMQ MKLEKKFGQS PVFVASARME NGGMARNASP ACLLKEAIQV ISCGYEDKTE WGKEIGWIYG SVTEDILTGF KMHSHGWRSV
0801: YCTPKLAAFK GSAPINLSDR LHQVLRWALG SVEIFLSRHC PIWYGYGGGL KWLERLSYIN SVVYPWTSLP LIVYCSLPAI CLLTGKFIVP EISNYASILF
0901: MALFSSIAIT GILEMQWGKV GIDDWWRNEQ FWVIGGVSAH LFALFQGLLK VLAGVDTNFT VTSKAADDGE FSDLYLFKWT SLLIPPMTLL IINVIGVIVG
1001: VSDAISNGYD SWGPLFGRLF FALWVIIHLY PFLKGLLGKQ DRMPTIIVVW SILLASILTL LWVRVNPFVA KGGPILEICG LDCL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)