AT5G64600.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.720 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : O-fucosyltransferase family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G22460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:25825178..25827931 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 60060.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.92 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.55 | ||||||||||||||||||||||||||||||||||||
| Length | 522 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVKHRNSSRS IISYSSSIAR FFSRKAISLY LIFVFAFTIW VLVFSSRNIQ TDDDHTKHQQ QHHRDLIDSE SFPPPYLPPR KNLQKPYENT QLWTPPFSFG 101: LHPCVKPTPK YKEFSESDHY ITVKSNGGLN QMRTGIADIV AVAHIMNATL VIPELDKRSF WQDSSVFSDI FDEEQFIKSL RRDVKVIKKL PKEVESLPRA 201: RKHFTSWSSV GYYEEMTHLW KEYKVIHVAK SDSRLANNDL PIDVQRLRCR VLYRGLCFSP AIESLGQKLV ERLKSRAGRY IALHLRYEKD MLAFTGCTYG 301: LTDAESEELR VMRESTSHWK IKSINSTEQR EEGLCPLTPK EVGIFLKGLG YSQSTVIYIA AGEIYGGDDR LSELKSRFPN LVFKETLAGN EELKGFTGHA 401: TKTAALDYII SVESDVFVPS HSGNMARAVE GHRRFLGHRR TITPDRKGLV KLFVKMERGQ LKEGPKLSNF VNQMHKDRQG APRRRKGPTQ GIKGRARFRT 501: EEAFYENPYP ECICSSKEHK EP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)