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AT5G64350.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : FK506-binding protein 12
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
FK506-binding protein 12 (FKBP12); FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: chloroplast thylakoid lumen; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT3G55520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G64350-MONOMERBioGrid:21798EC:5.2.1.8eggNOG:COG0545eggNOG:KOG0544EMBL:AB008268EMBL:AY059928
EMBL:AY081564EMBL:AY084289EMBL:CP002688EMBL:U96924EnsemblPlants:AT5G64350EnsemblPlants:AT5G64350.1entrez:836556
GeneID:836556Genevisible:Q8LGG0GO:GO:0000413GO:GO:0003755GO:GO:0005528GO:GO:0005789GO:GO:0005829
GO:GO:0061077Gramene:AT5G64350.1hmmpanther:PTHR10516hmmpanther:PTHR10516:SF214HOGENOM:HOG000154887InParanoid:Q8LGG0IntAct:Q8LGG0
InterPro:IPR001179InterPro:IPR023566KEGG:ath:AT5G64350KO:K01802OMA:SVLDFEIPANTHER:PTHR10516PaxDb:Q8LGG0
Pfam:PF00254Pfam:Q8LGG0Pfscan:PS50059PhylomeDB:Q8LGG0PRIDE:Q8LGG0PRO:PR:Q8LGG0PROSITE:PS50059
ProteinModelPortal:Q8LGG0Proteomes:UP000006548RefSeq:NP_201240.1SMR:Q8LGG0STRING:3702.AT5G64350.1SUPFAM:SSF54534TAIR:AT5G64350
tair10-symbols:ATFKBP12tair10-symbols:FKBP12UniGene:At.24046UniGene:At.28037UniProt:Q8LGG0
Coordinates (TAIR10) chr5:-:25734810..25735990
Molecular Weight (calculated) 11988.20 Da
IEP (calculated) 5.83
GRAVY (calculated) -0.28
Length 112 amino acids
Sequence (TAIR10)
(BLAST)
001: MGVEKQVIRP GNGPKPAPGQ TVTVHCTGFG KDGDLSQKFW STKDEGQKPF SFQIGKGAVI KGWDEGVIGM QIGEVARLRC SSDYAYGAGG FPAWGIQPNS
101: VLDFEIEVLS VQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)