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AT5G64240.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 0.998
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : metacaspase 3
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
metacaspase 3 (MC3); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C14, caspase catalytic (InterPro:IPR011600); BEST Arabidopsis thaliana protein match is: metacaspase 1 (TAIR:AT1G02170.1); Has 1094 Blast hits to 1088 proteins in 266 species: Archae - 4; Bacteria - 271; Metazoa - 0; Fungi - 282; Plants - 308; Viruses - 0; Other Eukaryotes - 229 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410Y41CeggNOG:KOG1546EMBL:CP002688EnsemblPlants:AT5G64240EnsemblPlants:AT5G64240.1entrez:836545ExpressionAtlas:F4KDK6
Gene3D:3.40.50.1460GeneID:836545Gramene:AT5G64240.1hmmpanther:PTHR31773hmmpanther:PTHR31773:SF6InterPro:IPR029030InterPro:IPR033180
PANTHER:PTHR31773:SF6PaxDb:F4KDK6Pfam:PF00656PRIDE:F4KDK6ProteinModelPortal:F4KDK6Proteomes:UP000006548RefSeq:NP_851262.1
SMR:F4KDK6STRING:3702.AT5G64240.2SUPFAM:SSF52129TAIR:AT5G64240tair10-symbols:AtMC3tair10-symbols:MC3UniGene:At.20388
UniGene:At.60184UniProt:F4KDK6
Coordinates (TAIR10) chr5:+:25695836..25696923
Molecular Weight (calculated) 34617.30 Da
IEP (calculated) 7.86
GRAVY (calculated) -0.53
Length 305 amino acids
Sequence (TAIR10)
(BLAST)
001: MASRREVRCR CGRRMWVQPD ARTVQCSTCH TVTQLYSLVD IARGANRIIH GFQQLLRQHQ PQHHEQQQQQ MMAQPPPRLL EPLPSPFGKK RAVLCGVNYK
101: GKSYSLKGCI SDAKSMRSLL VQQMGFPIDS ILMLTEDEAS PQRIPTKRNI RKAMRWLVEG NRARDSLVFH FSGHGSQQND YNGDEIDGQD EALCPLDHET
201: EGKIIDDEIN RILVRPLVHG AKLHAVIDAC NSGTVLDLPF ICRMERNGSY EWEDHRSVRA YKGTDGGAAF CFSACDDDES SGYTPVCFHY IIHHHATKHT
301: YLSVC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)