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AT5G64230.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.748
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G19920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410ISJJeggNOG:ENOG4111IDZEMBL:CP002688EnsemblPlants:AT5G64230EnsemblPlants:AT5G64230.1entrez:836544GeneID:836544
Gramene:AT5G64230.1hmmpanther:PTHR31060hmmpanther:PTHR31060:SF4InParanoid:F4KDK4KEGG:ath:AT5G64230ncoils:CoilOMA:EPRLQGS
PaxDb:F4KDK4PRIDE:F4KDK4ProteinModelPortal:F4KDK4Proteomes:UP000006548RefSeq:NP_568987.2TAIR:AT5G64230UniGene:At.26542
UniProt:F4KDK4
Coordinates (TAIR10) chr5:+:25692572..25693909
Molecular Weight (calculated) 42669.50 Da
IEP (calculated) 8.27
GRAVY (calculated) -0.13
Length 379 amino acids
Sequence (TAIR10)
(BLAST)
001: MEKLSSAAVV PQLLRNIIVA VVVFADESLL QISGNSKLLE KLRVFLVTCF LFFLRSLPSI VSFANPNSSV VSFANPYSSK TKKKNKILVI NHCEESGIGR
101: AIWQLLSAMN EIPVSSRKYQ VVRSLAERLI NDNQGENSVA LLDLNRRVLN ASFRTTLSRL ETAVERNPNR RDIDEPVRRG LNRVVRAVVR AVGDGFIGWG
201: GEETADQTAE TSEKLAAELL WLAEKMAVYG FVDEAVEKWA SASNLAWLAL SCEPRLQCSL IQISALLFKE AKDIKKGSEE EEGEEAKLRE IKKKMLISWI
301: PLLCRASNGA DKPVLRSAER AYLEKVLEKM ISELKEEEQE RVLSLWLHHY THCASSDWPD LNGSYVRWCH SSRQLLLLG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)