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AT5G64190.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.848
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410II8ZeggNOG:ENOG410YFJIEMBL:AB008268EMBL:CP002688
EnsemblPlants:AT5G64190EnsemblPlants:AT5G64190.1entrez:836540GeneID:836540
Gramene:AT5G64190.1hmmpanther:PTHR31439HOGENOM:HOG000237528KEGG:ath:AT5G64190
OMA:LYLRENCPhylomeDB:Q9FMG5Proteomes:UP000006548RefSeq:NP_201224.1
TAIR:AT5G64190UniGene:At.23698UniGene:At.49215UniProt:Q9FMG5
Coordinates (TAIR10) chr5:+:25679432..25681153
Molecular Weight (calculated) 57458.90 Da
IEP (calculated) 9.49
GRAVY (calculated) -0.23
Length 502 amino acids
Sequence (TAIR10)
(BLAST)
001: MSEKFPDVFT WIQNIPQITK WRTTSLPFCI CPSTSDFPNS TLNLTAQKSP SPKVVTFSII VQSNNHSPLY LWTTKQELSI NPNSPNPFDE LTIISLLFNF
101: VETILTYTSN SSNYSTIKIP NSDSSKIGGL KDIVNTVILT LSFVVCVYEA PLYLRENCLN TLKNHLITCH TRRATISLMK LLGSNLEEQW MRTVNLAFTN
201: WIIEQRRSQS TKITTTPLFS YAVSAYGLWK VQLYCPVEAM EVERSSNPTA DSRLLFSLKF NQLEGVMQFN HKVVVRDNWI DVIVKIDNIR YDVIKLVNEK
301: LMSRRGAGEH EKHFPSRISL QLTPTLQTDF ISVSVSKSSN NPGREFEVER SIEGSFDPPN SLGLRVAGRE ASTMTMTPWK LEQSVLGYTA NLNWILYDSS
401: VGGREVFSTK PSRFSIMSPR SWFKDRYARA YRSFTRRGGV IFAGDEYGES VVWKIGKGAL GGTMEWEIKG FIWLTYWPNK YKTFYHETRR LEFTQLLNLT
501: IA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)