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AT5G64100.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31541795 (2020): plasma membrane
  • PMID:31520498 (2020): mitochondrion
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi
  • PMID:22923678 (2012): plasma membrane
  • PMID:22318864 (2012): plasma membrane
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21109274 (2011): extracellular region
  • PMID:19334764 (2009): plasma membrane
  • PMID:16356755 (2006): extracellular region
  • PMID:14595688 (2003): extracellular region
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Peroxidase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: cell wall; EXPRESSED IN: hypocotyl, root, callus; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G64110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G64100-MONOMEREC:1.11.1.7eggNOG:ENOG410JX47eggNOG:ENOG41104B9
EMBL:AB008266EMBL:AY093012EMBL:CP002688EMBL:X98808
EnsemblPlants:AT5G64100EnsemblPlants:AT5G64100.1entrez:836531GeneID:836531
Genevisible:Q96511GO:GO:0004601GO:GO:0005576GO:GO:0005618
GO:GO:0005886GO:GO:0006979GO:GO:0009506GO:GO:0020037
GO:GO:0042744GO:GO:0046872Gramene:AT5G64100.1hmmpanther:PTHR31235
hmmpanther:PTHR31235:SF27HOGENOM:HOG000237556InParanoid:Q96511InterPro:IPR000823
InterPro:IPR002016InterPro:IPR010255InterPro:IPR019793InterPro:IPR019794
iPTMnet:Q96511KEGG:00940+1.11.1.7KEGG:ath:AT5G64100KO:K00430
OMA:TAQGNRGPaxDb:Q96511PeroxiBase:235Pfam:PF00141
Pfam:Q96511Pfscan:PS50873PhylomeDB:Q96511PRIDE:Q96511
PRINTS:PR00458PRINTS:PR00461PRO:PR:Q96511PROSITE:PS00435
PROSITE:PS00436PROSITE:PS50873ProteinModelPortal:Q96511Proteomes:UP000006548
RefSeq:NP_201215.1scanprosite:PS00435scanprosite:PS00436SMR:Q96511
STRING:3702.AT5G64100.1SUPFAM:SSF48113TAIR:AT5G64100TMHMM:TMhelix
UniGene:At.25608UniProt:Q96511
Coordinates (TAIR10) chr5:-:25650824..25652062
Molecular Weight (calculated) 35681.00 Da
IEP (calculated) 9.73
GRAVY (calculated) -0.07
Length 331 amino acids
Sequence (TAIR10)
(BLAST)
001: MGRGYNLLFV LVTFLVLVAA VTAQGNRGSN SGGGRRPHVG FYGNRCRNVE SIVRSVVQSH VRSIPANAPG ILRMHFHDCF VHGCDGSVLL AGNTSERTAV
101: PNRSLRGFEV IEEAKARLEK ACPRTVSCAD ILTLAARDAV VLTGGQRWEV PLGRLDGRIS QASDVNLPGP SDSVAKQKQD FAAKTLNTLD LVTLVGGHTI
201: GTAGCGLVRG RFVNFNGTGQ PDPSIDPSFV PLILAQCPQN GGTRVELDEG SVDKFDTSFL RKVTSSRVVL QSDLVLWKDP ETRAIIERLL GLRRPSLRFG
301: TEFGKSMVKM SLIEVKTGSD GEIRRVCSAI N
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)