suba logo
AT5G63650.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
nucleus 0.957
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : SNF1-related protein kinase 2.5
Curator
Summary (TAIR10)
encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress.
Computational
Description (TAIR10)
SNF1-related protein kinase 2.5 (SNRK2.5); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: SNF1-related protein kinase 2.1 (TAIR:AT5G08590.1); Has 132292 Blast hits to 116481 proteins in 3406 species: Archae - 169; Bacteria - 13418; Metazoa - 52934; Fungi - 13701; Plants - 25794; Viruses - 1077; Other Eukaryotes - 25199 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G63650-MONOMERBioGrid:21727EC:2.7.11.1eggNOG:COG0515eggNOG:KOG0583EMBL:AB005234EMBL:AK227726
EMBL:AY087955EMBL:CP002688EnsemblPlants:AT5G63650EnsemblPlants:AT5G63650.1entrez:836485GeneID:836485Genevisible:Q9FFP9
GO:GO:0004674GO:GO:0005524GO:GO:0005634GO:GO:0005737GO:GO:0006468GO:GO:0006970GO:GO:0009651
GO:GO:0016301GO:GO:0035556Gramene:AT5G63650.1hmmpanther:PTHR24343hmmpanther:PTHR24343:SF101HOGENOM:HOG000233016InParanoid:Q9FFP9
InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441iPTMnet:Q9FFP9KEGG:ath:AT5G63650KO:K14498
ncoils:CoilOMA:AYYKRETPaxDb:Q9FFP9Pfam:PF00069Pfam:Q9FFP9Pfscan:PS50011PhylomeDB:Q9FFP9
PRIDE:Q9FFP9PRO:PR:Q9FFP9PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:Q9FFP9Proteomes:UP000006548
Reactome:R-ATH-163680Reactome:R-ATH-200425Reactome:R-ATH-380972RefSeq:NP_201170.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220
SMR:Q9FFP9STRING:3702.AT5G63650.1SUPFAM:SSF56112TAIR:AT5G63650tair10-symbols:SNRK2-5tair10-symbols:SNRK2.5tair10-symbols:SRK2H
UniGene:At.28988UniProt:Q9FFP9
Coordinates (TAIR10) chr5:-:25481631..25483495
Molecular Weight (calculated) 41556.10 Da
IEP (calculated) 4.97
GRAVY (calculated) -0.65
Length 360 amino acids
Sequence (TAIR10)
(BLAST)
001: MDKYEVVKDL GAGNFGVARL LRHKETKELV AMKYIERGRK IDENVAREII NHRSLRHPNI IRFKEVILTP THLAIVMEYA SGGELFERIC NAGRFSEAEA
101: RYFFQQLICG VDYCHSLQIC HRDLKLENTL LDGSPAPLLK ICDFGYSKSS LLHSRPKSTV GTPAYIAPEV LSRREYDGKH ADVWSCGVTL YVMLVGGYPF
201: EDPDDPRNFR KTIQRIMAVQ YKIPDYVHIS QECRHLLSRI FVTNSAKRIT LKEIKKHPWY LKNLPKELTE PAQAAYYKRE TPSFSLQSVE DIMKIVGEAR
301: NPAPSSNAVK GFDDDEEDVE DEVEEEEEEE EEEEEEEEEE EDEYEKHVKE AHSCQEPPKA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)