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AT5G63560.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : HXXXD-type acyl-transferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.04 four leaves visible, F mature embryo stage, 4 leaf senescence stage, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G48720.1); Has 2881 Blast hits to 2866 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 171; Plants - 2704; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G63560-MONOMEReggNOG:ENOG410IY69eggNOG:ENOG410YUQMEMBL:AB005234EMBL:AY035105EMBL:AY142537EMBL:CP002688
EnsemblPlants:AT5G63560EnsemblPlants:AT5G63560.1entrez:836475Gene3D:3.30.559.10GeneID:836475GO:GO:0090430GO:GO:0090431
Gramene:AT5G63560.1gramene_pathway:2.3.1.133gramene_pathway:PWY-361gramene_pathway:PWY-5868hmmpanther:PTHR31642hmmpanther:PTHR31642:SF10InterPro:IPR003480
InterPro:IPR023213KEGG:ath:AT5G63560OMA:ANCGIEKPfam:PF02458PhylomeDB:Q9FFQ7Proteomes:UP000006548RefSeq:NP_201161.1
SMR:Q9FFQ7STRING:3702.AT5G63560.1TAIR:AT5G63560UniGene:At.21556UniProt:Q9FFQ7
Coordinates (TAIR10) chr5:+:25449517..25451234
Molecular Weight (calculated) 47115.10 Da
IEP (calculated) 6.28
GRAVY (calculated) 0.00
Length 426 amino acids
Sequence (TAIR10)
(BLAST)
001: MADSFELIVT RKEPVLVSPA SETPKGLHYL SNLDQNIAII VKTFYYFKSN SRSNEESYEV IKKSLSEVLV HYYPAAGRLT ISPEGKIAVD CTGEGVVVVE
101: AEANCGIEKI KKAISEIDQP ETLEKLVYDV PGARNILEIP PVVVQVTNFK CGGFVLGLGM NHNMFDGIAA MEFLNSWAET ARGLPLSVPP FLDRTLLRPR
201: TPPKIEFPHN EFEDLEDISG TGKLYSDEKL VYKSFLFGPE KLERLKIMAE TRSTTFQTLT GFLWRARCQA LGLKPDQRIK LLFAADGRSR FVPELPKGYS
301: GNGIVFTYCV TTAGEVTLNP LSHSVCLVKR AVEMVNDGFM RSAIDYFEVT RARPSLTATL LITSWAKLSF HTKDFGWGEP VVSGPVGLPE KEVILFLPCG
401: SDTKSINVLL GLPGSAMKVF QGIMDI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)