AT5G63450.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.962 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 94, subfamily B, polypeptide 1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of CYP94B | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 94, subfamily B, polypeptide 1 (CYP94B1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 3 (TAIR:AT3G48520.1); Has 25811 Blast hits to 25731 proteins in 1391 species: Archae - 44; Bacteria - 2296; Metazoa - 9758; Fungi - 5338; Plants - 7375; Viruses - 3; Other Eukaryotes - 997 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:25408987..25410519 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 57785.20 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.97 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.13 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 510 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEMLNAIILI LFPIIGFVLI FSFPTKTLKA KTASPSNPTS YQLIGSILSF NKNRHRLLQW YTDLLRLSPS QTITVDLLFG RRTIITANPE NVEHILKTNF 101: YNFPKGKPFT DLLGDLLGGG IFNSDGELWS SQRKLASHEF TMRSLREFTF EILREEVQNR LIPVLSSAVD CGETVDFQEV LKRFAFDVVC KVSLGWDPDC 201: LDLTRPVPEL VKAFDVAAEI SARRATEPVY AVWKVKRFLN VGSEKRLREA IKTVHLSVSE IIRAKKKSLD IGGDVSDKQD LLSRFLAAGH GEEAVRDSVI 301: SFIMAGRDTT SAAMTWLFWL LSQNDDVETK ILDELRNKGS LGLGFEDLRE MSYTKACLCE AMRLYPPVAW DSKHAANDDI LPDGTPLKKG DKVTYFPYGM 401: GRMEKVWGKD WDEFKPNRWF EEEPSYGTKP VLKSVSSFKF PVFQAGPRVC IGKEMAFTQM KYVVGSVLSR FKIIPVCNNR PVFVPLLTAH MAGGLKVKIK 501: RREQCDSMYI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)