AT5G63410.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G14210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:25395173..25397768 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 76269.70 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.78 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.15 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 680 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGLFKFIFLL SLLWSFYSLG SSQLQASQAQ VLLQLKKHLE YPQQLESWYD HRTNFCYLQA TPSMNITCFS NSVSELNIFG DKSSEKAKSF DGFAISNVTL 101: SDGFSIESFV TTLSRLKSLR VLTLASLGIW GRLPEKLHRL SSLEYLDLSN NFLFGSVPPK LSTMVKLETF RFDHNFFNGT LPSWFDSYWY LKVLSFKSNK 201: LSGELHSSLL SLSTIEYIDL RANSLSGSLP DDLKCGSKLW FIDISDNKLT GKLPRCLSSK QDIALRFNGN CLSLEKQQHP ESFCVKEVRA AAKAEAKAEA 301: EAANESGKRK WKKGALIGLI VGISMSVLVL VCCVFILLRR KGVTKKHVHH NTVQDNHPTT GFSSEILSNA RYISETSKFG SEDLPVCRQF SLEEIVKATK 401: NFDKTMILGE SSLYGTLYKG NLENGTKVAI RCLPSSKKYS IRNLKLRLDL LAKLRHPNLV CLLGHCIDCG GKDDYSVEKV FLIYEYIPNG NFQSCLSDNS 501: SGKGMNWSER LNVLTGVAKA VHFLHTGVIP GFFSNRLKTN NVLLNQHRFA KLSDYGLSIV SEATRHNTEI AKSWQMSRLE DDVYSFGLIL LQSIVGPSVS 601: AREEAFLRDE LASLESEEGR RRMVNPTVQA TCRNGSLIRV ITLMNKCVSP ESLSRPSFED ILWNLQYASQ LQAASDGDQC |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)