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AT5G63410.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G14210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G63410-MONOMEReggNOG:ENOG410IKBHeggNOG:ENOG410YAQMEMBL:BT003851EMBL:BT005078EMBL:CP002688EMBL:FJ708812
EnsemblPlants:AT5G63410EnsemblPlants:AT5G63410.1entrez:836460Gene3D:2.60.120.200Gene3D:3.80.10.10GeneID:836460GO:GO:0004672
GO:GO:0005524GO:GO:0016021Gramene:AT5G63410.1hmmpanther:PTHR27003hmmpanther:PTHR27003:SF39HOGENOM:HOG000240482InterPro:IPR000719
InterPro:IPR001245InterPro:IPR001611InterPro:IPR011009InterPro:IPR013210InterPro:IPR013320InterPro:IPR032675KEGG:ath:AT5G63410
OMA:LWFIDISPfam:PF00560Pfam:PF07714Pfam:PF08263Pfscan:PS50011PhylomeDB:Q84JF8PROSITE:PS50011
Proteomes:UP000006548RefSeq:NP_568971.1SMR:Q84JF8SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT5G63410TMHMM:TMhelix
UniGene:At.23707UniProt:Q84JF8
Coordinates (TAIR10) chr5:-:25395173..25397768
Molecular Weight (calculated) 76269.70 Da
IEP (calculated) 8.78
GRAVY (calculated) -0.15
Length 680 amino acids
Sequence (TAIR10)
(BLAST)
001: MGLFKFIFLL SLLWSFYSLG SSQLQASQAQ VLLQLKKHLE YPQQLESWYD HRTNFCYLQA TPSMNITCFS NSVSELNIFG DKSSEKAKSF DGFAISNVTL
101: SDGFSIESFV TTLSRLKSLR VLTLASLGIW GRLPEKLHRL SSLEYLDLSN NFLFGSVPPK LSTMVKLETF RFDHNFFNGT LPSWFDSYWY LKVLSFKSNK
201: LSGELHSSLL SLSTIEYIDL RANSLSGSLP DDLKCGSKLW FIDISDNKLT GKLPRCLSSK QDIALRFNGN CLSLEKQQHP ESFCVKEVRA AAKAEAKAEA
301: EAANESGKRK WKKGALIGLI VGISMSVLVL VCCVFILLRR KGVTKKHVHH NTVQDNHPTT GFSSEILSNA RYISETSKFG SEDLPVCRQF SLEEIVKATK
401: NFDKTMILGE SSLYGTLYKG NLENGTKVAI RCLPSSKKYS IRNLKLRLDL LAKLRHPNLV CLLGHCIDCG GKDDYSVEKV FLIYEYIPNG NFQSCLSDNS
501: SGKGMNWSER LNVLTGVAKA VHFLHTGVIP GFFSNRLKTN NVLLNQHRFA KLSDYGLSIV SEATRHNTEI AKSWQMSRLE DDVYSFGLIL LQSIVGPSVS
601: AREEAFLRDE LASLESEEGR RRMVNPTVQA TCRNGSLIRV ITLMNKCVSP ESLSRPSFED ILWNLQYASQ LQAASDGDQC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)