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AT5G63350.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.981
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48510.1); Has 103 Blast hits to 102 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IXU5eggNOG:ENOG410YJ5TEMBL:AB023035EMBL:BT002821EMBL:BT004383EMBL:CP002688EnsemblPlants:AT5G63350
EnsemblPlants:AT5G63350.1entrez:836455GeneID:836455Gramene:AT5G63350.1hmmpanther:PTHR33595hmmpanther:PTHR33595:SF3HOGENOM:HOG000090359
KEGG:ath:AT5G63350OMA:EDINIPMProteomes:UP000006548RefSeq:NP_201140.1STRING:3702.AT5G63350.1TAIR:AT5G63350UniGene:At.29001
UniProt:Q9FGW7
Coordinates (TAIR10) chr5:-:25380216..25381124
Molecular Weight (calculated) 33216.60 Da
IEP (calculated) 9.24
GRAVY (calculated) -0.54
Length 302 amino acids
Sequence (TAIR10)
(BLAST)
001: MDGRGGCCIA RYGGYGGRYG LSKADRIMLR FRPIAPKPAS DGGSVSLTGK SGSTTTTSGG SSDLSGKSGR GKRKYQKDCS GGNSRRCNKK KRDLSGDTAT
101: TTAVTLSLLP ETPEKRVFPD LNAFPVEKQK RNGPLWLSFN GGGEILTPYK TAEISRRTVV VSSCVTVERV TDAWIDGYGL GETNQERKMN LVEDTCPGFI
201: SDGVGRVTWT NEAYKKMARE DINIPMEEGV PEDISYDNFH VNVRLVMKER PMLTYPAFTC RVRLQYTCQD RERGSVTVPC DVWRMDGGGF AWRLDVKAAL
301: CL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)