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AT5G63100.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G44600.1); Has 163 Blast hits to 163 proteins in 58 species: Archae - 2; Bacteria - 69; Metazoa - 2; Fungi - 2; Plants - 84; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IFFIeggNOG:ENOG4111JQ3EMBL:AB008265EMBL:CP002688EnsemblPlants:AT5G63100EnsemblPlants:AT5G63100.1entrez:836430
Gene3D:3.40.50.150GeneID:836430GO:GO:0008168GO:GO:0009507Gramene:AT5G63100.1hmmpanther:PTHR12176hmmpanther:PTHR12176:SF29
HOGENOM:HOG000239579InterPro:IPR029063KEGG:ath:AT5G63100OMA:MDVDESWPhylomeDB:Q9FML3Proteomes:UP000006548RefSeq:NP_201115.1
STRING:3702.AT5G63100.1SUPFAM:SSF53335TAIR:AT5G63100UniGene:At.8833UniProt:Q9FML3
Coordinates (TAIR10) chr5:-:25314434..25315423
Molecular Weight (calculated) 37005.70 Da
IEP (calculated) 8.63
GRAVY (calculated) -0.20
Length 329 amino acids
Sequence (TAIR10)
(BLAST)
001: MARELVSLQY LRPPLHISRQ FLNLSSPPLT LNLRPKPPQN PIFIRTDSHR NKTSADDNGI PAEDVKTIAK FKSRHNYIRV IEVSRKTNHP LAGSRLLLLD
101: NPGNIHSISF LLKTLTDSYF DVFATLPPII PPGPIGILGF GAGSTARLIL ELYPPEIAVH GWELDPSVID VGREFFGLSK LERDHKDRIF INIGDALNAS
201: VKTGFSGILV DLFSKGSVIK ELQDPQVWED LKSRLRYRGR IMVNVGGKCV EAEDSDRDGA LVMEETLRVM SQVFGDKLFV LTLGNGNDSS VALTGDLPDL
301: DAWKKRLPRS ELRSYVDMWI PYREFCLRY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)