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AT5G62750.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 24942 Blast hits to 11726 proteins in 897 species: Archae - 48; Bacteria - 2086; Metazoa - 8361; Fungi - 2243; Plants - 1040; Viruses - 210; Other Eukaryotes - 10954 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JVJAeggNOG:ENOG41105UTEMBL:AB009053EMBL:AY085808EMBL:BT028886EMBL:CP002688EnsemblPlants:AT5G62750
EnsemblPlants:AT5G62750.1entrez:836396GeneID:836396Gramene:AT5G62750.1hmmpanther:PTHR36812KEGG:ath:AT5G62750ncoils:Coil
OMA:KIQAMVLProteomes:UP000006548RefSeq:NP_201081.1TAIR:AT5G62750UniGene:At.47212UniProt:Q9FM18
Coordinates (TAIR10) chr5:-:25203677..25204051
Molecular Weight (calculated) 14243.70 Da
IEP (calculated) 9.32
GRAVY (calculated) -2.02
Length 124 amino acids
Sequence (TAIR10)
(BLAST)
001: MGETEEKVKN HDNKEEEHNK AEKAEKKEKK KDKDKKDKNE DDKNGGGEEG EDQEKKSKKK DKKAKKEKNP EDKKDPEKLK MKLQKIEEKI QAMVLKKDEI
101: VKLIHDAEQA KPSTAAVDAP PPTN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)