suba logo
AT5G62230.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : ERECTA-like 1
Curator
Summary (TAIR10)
Encodes a receptor-like kinase that, together with ER and ERL2 governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. It is important for maintaining stomatal stem cell activity and preventing terminal differentiation of the meristemoid into the guard mother cell. Along with erl2 functionally compensates for loss of erecta during integument development.
Computational
Description (TAIR10)
ERECTA-like 1 (ERL1); FUNCTIONS IN: kinase activity; INVOLVED IN: stomatal complex morphogenesis, embryo sac development, ovule development; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ERECTA-like 2 (TAIR:AT5G07180.1); Has 222426 Blast hits to 137934 proteins in 3754 species: Archae - 152; Bacteria - 22676; Metazoa - 73214; Fungi - 10790; Plants - 88135; Viruses - 480; Other Eukaryotes - 26979 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G62230-MONOMERBioCyc:ARA:GQT-2454-MONOMERBioGrid:21588EC:2.7.11.1
eggNOG:COG0515eggNOG:COG4886eggNOG:ENOG410IFETEMBL:AB019235
EMBL:AK118052EMBL:AY244745EMBL:CP002688EMBL:FJ708810
EnsemblPlants:AT5G62230EnsemblPlants:AT5G62230.1entrez:836344ExpressionAtlas:C0LGW6
Gene3D:3.80.10.10GeneID:836344Genevisible:C0LGW6GO:GO:0004674
GO:GO:0005524GO:GO:0005886GO:GO:0009553GO:GO:0010103
GO:GO:0016020GO:GO:0016021GO:GO:0048481hmmpanther:PTHR27000
hmmpanther:PTHR27000:SF84HOGENOM:HOG000116551InParanoid:C0LGW6InterPro:IPR000719
InterPro:IPR001611InterPro:IPR003591InterPro:IPR008271InterPro:IPR011009
InterPro:IPR013210InterPro:IPR017441InterPro:IPR032675OMA:GNCASLV
PaxDb:C0LGW6Pfam:C0LGW6Pfam:PF00069Pfam:PF08263
Pfam:PF13516Pfam:PF13855Pfscan:PS50011PhylomeDB:C0LGW6
PRIDE:C0LGW6PRO:PR:C0LGW6PROSITE:PS00107PROSITE:PS00108
PROSITE:PS50011ProteinModelPortal:C0LGW6Proteomes:UP000006548RefSeq:NP_201029.1
scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMART:SM00369
SMR:C0LGW6STRING:3702.AT5G62230.1SUPFAM:SSF52058SUPFAM:SSF56112
TAIR:AT5G62230tair10-symbols:ERL1TMHMM:TMhelixUniGene:At.29062
UniGene:At.51106UniProt:C0LGW6
Coordinates (TAIR10) chr5:+:24996433..25002130
Molecular Weight (calculated) 106493.00 Da
IEP (calculated) 7.08
GRAVY (calculated) 0.04
Length 966 amino acids
Sequence (TAIR10)
(BLAST)
001: MKEKMQRMVL SLAMVGFMVF GVASAMNNEG KALMAIKGSF SNLVNMLLDW DDVHNSDLCS WRGVFCDNVS YSVVSLNLSS LNLGGEISPA IGDLRNLQSI
101: DLQGNKLAGQ IPDEIGNCAS LVYLDLSENL LYGDIPFSIS KLKQLETLNL KNNQLTGPVP ATLTQIPNLK RLDLAGNHLT GEISRLLYWN EVLQYLGLRG
201: NMLTGTLSSD MCQLTGLWYF DVRGNNLTGT IPESIGNCTS FQILDISYNQ ITGEIPYNIG FLQVATLSLQ GNRLTGRIPE VIGLMQALAV LDLSDNELVG
301: PIPPILGNLS FTGKLYLHGN MLTGPIPSEL GNMSRLSYLQ LNDNKLVGTI PPELGKLEQL FELNLANNRL VGPIPSNISS CAALNQFNVH GNLLSGSIPL
401: AFRNLGSLTY LNLSSNNFKG KIPVELGHII NLDKLDLSGN NFSGSIPLTL GDLEHLLILN LSRNHLSGQL PAEFGNLRSI QMIDVSFNLL SGVIPTELGQ
501: LQNLNSLILN NNKLHGKIPD QLTNCFTLVN LNVSFNNLSG IVPPMKNFSR FAPASFVGNP YLCGNWVGSI CGPLPKSRVF SRGALICIVL GVITLLCMIF
601: LAVYKSMQQK KILQGSSKQA EGLTKLVILH MDMAIHTFDD IMRVTENLNE KFIIGYGASS TVYKCALKSS RPIAIKRLYN QYPHNLREFE TELETIGSIR
701: HRNIVSLHGY ALSPTGNLLF YDYMENGSLW DLLHGSLKKV KLDWETRLKI AVGAAQGLAY LHHDCTPRII HRDIKSSNIL LDENFEAHLS DFGIAKSIPA
801: SKTHASTYVL GTIGYIDPEY ARTSRINEKS DIYSFGIVLL ELLTGKKAVD NEANLHQLIL SKADDNTVME AVDPEVTVTC MDLGHIRKTF QLALLCTKRN
901: PLERPTMLEV SRVLLSLVPS LQVAKKLPSL DHSTKKLQQE NEVRNPDAEA SQWFVQFREV ISKSSI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)