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AT5G62050.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : homolog of yeast oxidase assembly 1 (OXA1)
Curator
Summary (TAIR10)
essential factor for protein sorting and assembly into membranes
Computational
Description (TAIR10)
homolog of yeast oxidase assembly 1 (OXA1) (OXA1); FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein import into mitochondrial inner membrane, protein complex assembly; LOCATED IN: mitochondrion, mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Membrane insertion protein, OxaA/YidC (InterPro:IPR001708), Membrane insertion protein, OxaA/YidC, core (InterPro:IPR020001); BEST Arabidopsis thaliana protein match is: inner membrane protein OXA1-like (TAIR:AT2G46470.1); Has 6982 Blast hits to 6979 proteins in 2374 species: Archae - 0; Bacteria - 4991; Metazoa - 235; Fungi - 246; Plants - 190; Viruses - 0; Other Eukaryotes - 1320 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0706eggNOG:KOG1239EMBL:AB016880EMBL:AB035892
EMBL:AY088837EMBL:AY140006EMBL:BT006574EMBL:CP002688
EMBL:Y11871EMBL:Z29024EMBL:Z29025EnsemblPlants:AT5G62050
EnsemblPlants:AT5G62050.1entrez:836325GeneID:836325Genevisible:Q42191
GO:GO:0005739GO:GO:0005743GO:GO:0016021GO:GO:0051205
Gramene:AT5G62050.1hmmpanther:PTHR12428hmmpanther:PTHR12428:SF23HOGENOM:HOG000083474
InParanoid:Q42191InterPro:IPR001708InterPro:IPR028055iPTMnet:Q42191
KEGG:ath:AT5G62050KO:K03217ncoils:CoilOMA:EMRTISS
PANTHER:PTHR12428PaxDb:Q42191Pfam:PF02096Pfam:Q42191
PhylomeDB:Q42191PRIDE:Q42191PRO:PR:Q42191ProteinModelPortal:Q42191
Proteomes:UP000006548RefSeq:NP_201011.1SMR:Q42191STRING:3702.AT5G62050.1
TAIR:AT5G62050tair10-symbols:ATOXA1tair10-symbols:OXA1tair10-symbols:OXA1AT
TIGRfam:TIGR03592TIGRFAMs:TIGR03592TMHMM:TMhelixUniGene:At.85
UniProt:Q42191
Coordinates (TAIR10) chr5:-:24924062..24926758
Molecular Weight (calculated) 47862.50 Da
IEP (calculated) 10.07
GRAVY (calculated) -0.10
Length 429 amino acids
Sequence (TAIR10)
(BLAST)
001: MAFRQTLSIR SRLFARRNQP VYHIIPRESD HERDSFCQET SQRSYHSFLH QRSVNNSDFS KVSGGSLHLP LAPTSGFAFY RYMSSAPGVG SEKIGVMSDI
101: AEVITDSTLQ DVPAQAAAAV SEVTLAAADS FFPIAALQQC IDMVHTFTGF EWWASIVVAT ILIRSSTVPL LIKQMKDTTK LALMRPRLES IREEMQNKGM
201: DSVTMAEGQK KMKNLFKEYG VTPFTPMKGM FIQGPLFICF FLAIRNMAEK VPSFQTGGAL WFTDLTTPDS LYILPVITGL TFLITVECNA QEGMEGNPMA
301: GTVKTVCRVF ALLTVPMTMS FPQAIFCYWI TSNLFSLMYG LVIKRPQVKK MLRIPDLPPP PPGQQPSFDL FSALKKMKAM TQDHTQNQIE PPSPVNPRLS
401: STSLSPVSKR LKALESQVKG RKKNSSKKK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)