AT5G61850.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : floral meristem identity control protein LEAFY (LFY) | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes transcriptional regulator that promotes the transition to flowering.Involved in floral meristem development. LFY is involved in the regulation of AP3 expression, and appears to bring the F-box protein UFO to the AP3 promoter. | ||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
LEAFY (LFY); CONTAINS InterPro DOMAIN/s: Floricaula/leafy protein (InterPro:IPR002910); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:24844295..24846933 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 46584.90 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.11 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.66 | ||||||||||||||||||||||||||||||||
| Length | 420 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDPEGFTSGL FRWNPTRALV QAPPPVPPPL QQQPVTPQTA AFGMRLGGLE GLFGPYGIRF YTAAKIAELG FTASTLVGMK DEELEEMMNS LSHIFRWELL 101: VGERYGIKAA VRAERRRLQE EEEEESSRRR HLLLSAAGDS GTHHALDALS QEGLSEEPVQ QQDQTDAAGN NGGGGSGYWD AGQGKMKKQQ QQRRRKKPML 201: TSVETDEDVN EGEDDDGMDN GNGGSGLGTE RQREHPFIVT EPGEVARGKK NGLDYLFHLY EQCREFLLQV QTIAKDRGEK CPTKVTNQVF RYAKKSGASY 301: INKPKMRHYV HCYALHCLDE EASNALRRAF KERGENVGSW RQACYKPLVN IACRHGWDID AVFNAHPRLS IWYVPTKLRQ LCHLERNNAV AAAAALVGGI 401: SCTGSSTSGR GGCGGDDLRF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)