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AT5G61840.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
golgi 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:22923678 (2012): Golgi
  • PMID:22430844 (2012): Golgi
  • PMID:16618929 (2006): Golgi
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Exostosin family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
GUT1; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT1G27440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G61840-MONOMERCAZy:GT47EC:2.4.2.-eggNOG:ENOG410XTFHeggNOG:KOG1021EMBL:AB010069EMBL:AB080693
EMBL:AY054180EMBL:AY066039EMBL:AY087390EMBL:CP002688EMBL:KJ138631EnsemblPlants:AT5G61840EnsemblPlants:AT5G61840.1
entrez:836306GeneID:836306Genevisible:Q940Q8GO:GO:0000139GO:GO:0005768GO:GO:0005794GO:GO:0005802
GO:GO:0009834GO:GO:0010417GO:GO:0016021GO:GO:0042546GO:GO:0045492GO:GO:0047517GO:GO:0071555
GO:GO:0080116Gramene:AT5G61840.1hmmpanther:PTHR11062hmmpanther:PTHR11062:SF81HOGENOM:HOG000238629InParanoid:Q940Q8InterPro:IPR004263
KEGG:ath:AT5G61840OMA:QGNTERIPaxDb:Q940Q8Pfam:PF03016Pfam:Q940Q8PhylomeDB:Q940Q8PRIDE:Q940Q8
PRO:PR:Q940Q8Proteomes:UP000006548RefSeq:NP_568941.1STRING:3702.AT5G61840.1TAIR:AT5G61840tair10-symbols:GUT1UniGene:At.8499
UniProt:Q940Q8
Coordinates (TAIR10) chr5:-:24839365..24841703
Molecular Weight (calculated) 47197.10 Da
IEP (calculated) 7.21
GRAVY (calculated) -0.13
Length 415 amino acids
Sequence (TAIR10)
(BLAST)
001: MKLSSCVLIF LLCNTFSSIS AFRLSRSQPT ERISGSAGDV LEDDPVGRLK VFVYELPSKY NKKILQKDPR CLNHMFAAEI YMQRFLLSSP VRTLNPEEAD
101: WFYVPVYTTC DLTPNGLPLP FKSPRMMRSA IQLIASNWPY WNRTEGADHF FVVPHDFGAC FHYQEEKAIG RGILPLLQRA TLVQTFGQRN HVCLKEGSIT
201: VPPYAPPQKM QSHLIPEKTP RSIFVYFRGL FYDVGNDPEG GYYARGARAA VWENFKDNPL FDISTEHPTT YYEDMQRAIF CLCPLGWAPW SPRLVEAVIF
301: GCIPVIIADD IVLPFADAIP WEDIGVFVDE KDVPYLDTIL TSIPPEVILR KQRLLANPSM KQAMLFPQPA QPGDAFHQVL NGLARKLPHE RSVYLRPGEK
401: LLNWTAGPVA DLKPW
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)