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AT5G61810.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
peroxisome 0.545
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Mitochondrial substrate carrier family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, calcium ion binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Mitochondrial substrate carrier (InterPro:IPR001993), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Mitochondrial carrier protein (InterPro:IPR002067), EF-HAND 2 (InterPro:IPR018249), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G07320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XQ4PeggNOG:KOG0036EMBL:AB010069EMBL:AY056219EMBL:AY091353EMBL:CP002688EnsemblPlants:AT5G61810
EnsemblPlants:AT5G61810.1entrez:836303ExpressionAtlas:Q9FLS8Gene3D:1.10.238.10Gene3D:1.50.40.10GeneID:836303GO:GO:0003735
GO:GO:0005347GO:GO:0005509GO:GO:0005739GO:GO:0006412GO:GO:0015114GO:GO:0015217GO:GO:0015866
GO:GO:0015867GO:GO:0016021GO:GO:0035435GO:GO:0080121GO:GO:0080122Gramene:AT5G61810.1hmmpanther:PTHR24089
hmmpanther:PTHR24089:SF294HOGENOM:HOG000165728InterPro:IPR002048InterPro:IPR002067InterPro:IPR011992InterPro:IPR018108InterPro:IPR018247
InterPro:IPR023395OMA:YLHNYSAPfam:PF00153Pfam:PF13202Pfam:PF13499Pfscan:PS50222Pfscan:PS50920
PhylomeDB:Q9FLS8PRINTS:PR00926PROSITE:PS00018PROSITE:PS50222PROSITE:PS50920Proteomes:UP000006548RefSeq:NP_568940.1
scanprosite:PS00018SMART:SM00054SMR:Q9FLS8STRING:3702.AT5G61810.1SUPFAM:0048588SUPFAM:SSF103506SUPFAM:SSF47473
TAIR:AT5G61810UniGene:At.26357UniGene:At.49205UniProt:Q9FLS8
Coordinates (TAIR10) chr5:-:24831843..24833735
Molecular Weight (calculated) 53278.50 Da
IEP (calculated) 7.25
GRAVY (calculated) -0.17
Length 478 amino acids
Sequence (TAIR10)
(BLAST)
001: MEAEKSKQNP GKKPVEATME HVLVALRETK EKREIRIQKL FEFFDNSKLG FLDDTQIEKG LSSLSIPPKY RYASDFLKVC DSNRDGRVDY QEFRRYMDAK
101: ELELYKIFQA IDIEHNGDIC PAELWEALDK AGIKIKDEEL ASFMEHVDKD NNGIITFEEW RDFLLLNPHE ATIENIYHHW ERVCLIDIGE QAVIPDGISA
201: HAQRSKLLLA GGIAGAVSRT ATAPLDRLKV ALQVQRTNLG VVPTIKKIWR EDKLLGFFRG NGLNVAKVAP ESAIKFAAYE MLKPIIGGAD GDIGTSGRLL
301: AGGLAGAVAQ TAIYPMDLVK TRLQTFVSEV GTPKLWKLTK DIWIQEGPRA FYRGLCPSLI GIIPYAGIDL AAYETLKDLS RAHFLHDTAE PGPLIQLGCG
401: MTSGALGASC VYPLQVIRTR MQADSSKTSM GQEFLKTLRG EGLKGFYRGI FPNFFKVIPS ASISYLVYEA MKKNLALD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)