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AT5G61640.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.715
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : peptidemethionine sulfoxide reductase 1
Curator
Summary (TAIR10)
ubiquitous enzyme that repairs oxidatively damaged proteins
Computational
Description (TAIR10)
peptidemethionine sulfoxide reductase 1 (PMSR1); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity, oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: response to oxidative stress, protein modification process; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptide methionine sulphoxide reductase MsrA (InterPro:IPR002569); BEST Arabidopsis thaliana protein match is: peptidemethionine sulfoxide reductase 3 (TAIR:AT5G07470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G61640-MONOMEREC:1.8.4.11eggNOG:COG0225eggNOG:KOG1635
EMBL:AB012239EMBL:AK227434EMBL:BT005850EMBL:CP002688
EnsemblPlants:AT5G61640EnsemblPlants:AT5G61640.1entrez:836286Gene3D:3.30.1060.10
GeneID:836286Genevisible:Q9FKF7GO:GO:0005829GO:GO:0006979
GO:GO:0008113GO:GO:0030091Gramene:AT5G61640.1HAMAP:MF_01401
hmmpanther:PTHR10173hmmpanther:PTHR10173:SF23HOGENOM:HOG000263862InParanoid:Q9FKF7
InterPro:IPR002569InterPro:IPR028427KEGG:ath:AT5G61640OMA:TTNHAEI
PANTHER:PTHR10173PaxDb:Q9FKF7Pfam:PF01625Pfam:Q9FKF7
PhylomeDB:Q9FKF7PRIDE:Q9FKF7PRO:PR:Q9FKF7ProteinModelPortal:Q9FKF7
Proteomes:UP000006548Reactome:R-ATH-5676934RefSeq:NP_568937.1SMR:Q9FKF7
STRING:3702.AT5G61640.1SUPFAM:SSF55068TAIR:AT5G61640tair10-symbols:ATMSRA1
tair10-symbols:PMSR1TIGRfam:TIGR00401TIGRFAMs:TIGR00401UniGene:At.29091
UniProt:Q9FKF7
Coordinates (TAIR10) chr5:+:24775107..24776147
Molecular Weight (calculated) 22899.70 Da
IEP (calculated) 6.78
GRAVY (calculated) -0.80
Length 202 amino acids
Sequence (TAIR10)
(BLAST)
001: MNILNKLGIG SSRQTNMDPS PIAQVIDDEA PAPGNQFTQF GAGCFWSVEL AYQRVPGVTQ TEVGYSQGIT HDPSYKDVCS GTTNHAEIVR VQYDPKECSY
101: QSLLDLFWSK HDPTTLNRQG NDVGTQYRSG IYFYNPEQEK LARESLERHQ QQVDRKVVTE ILPAKKFYRA EEHHQQYLSK GGRFGLKQST EKGCNDPIRC
201: YG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)