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AT5G61550.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.751
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : U-box domain-containing protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), U box domain (InterPro:IPR003613), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT4G25160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G61550-MONOMERBioCyc:ARA:GQT-2247-MONOMEREC:2.7.11.-EC:6.3.2.-
eggNOG:COG0515eggNOG:ENOG410IJ5MEMBL:AB012239EMBL:AK228422
EMBL:CP002688EnsemblPlants:AT5G61550EnsemblPlants:AT5G61550.1entrez:836276
ExpressionAtlas:Q9FKG6Gene3D:3.30.40.10Gene3D:3.40.50.620GeneID:836276
Genevisible:Q9FKG6GO:GO:0004674GO:GO:0004842GO:GO:0005524
GO:GO:0016874hmmpanther:PTHR27003hmmpanther:PTHR27003:SF29HOGENOM:HOG000237993
InParanoid:Q9FKG6InterPro:IPR000719InterPro:IPR003613InterPro:IPR008271
InterPro:IPR011009InterPro:IPR013083InterPro:IPR014729ncoils:Coil
PaxDb:Q9FKG6Pfam:PF00069Pfam:PF04564Pfam:Q9FKG6
Pfscan:PS50011Pfscan:PS51698PhylomeDB:Q9FKG6PRIDE:Q9FKG6
PRO:PR:Q9FKG6PROSITE:PS00108PROSITE:PS50011PROSITE:PS51698
ProteinModelPortal:Q9FKG6Proteomes:UP000006548Reactome:R-ATH-5213460RefSeq:NP_200963.1
scanprosite:PS00108SMART:SM00220SMART:SM00504SMR:Q9FKG6
STRING:3702.AT5G61550.2SUPFAM:SSF52402SUPFAM:SSF56112SUPFAM:SSF57850
TAIR:AT5G61550UniGene:At.29099UniPathway:UPA00143UniProt:Q9FKG6
Coordinates (TAIR10) chr5:+:24748325..24751558
Molecular Weight (calculated) 94637.10 Da
IEP (calculated) 6.56
GRAVY (calculated) -0.39
Length 845 amino acids
Sequence (TAIR10)
(BLAST)
001: MEEKKVVRAL SEHLSLPPPP SPSVAVAING KKKSKYVVFW ALEKFIPEGF TDFKLLYVRP PVSYIPTPMG IAVAVSELRE DVVSAYKQEL DWSANEMLRP
101: YKKMFERRKV QVEVLLLDSL EPAAAIAEEI AGTGVTKLVI GMSLRGFFSR KIDMSSLIAT AVPRFCTVYV ISKGKLASVR PSESDASGSI RFERSSSTSG
201: STDSPRLPPE YQDFLSAVSE AQSRVSPFSP ALKHSMGSNA VAQMDTSSSG TDQEEVSTGR GMEIVHSGIE GKKNKDESFS ASFPMGTEAY NSMSWTSKWR
301: DHEDRREMRS SSSSNNHDLV NMDWGAVVPE NYSWVSHTAS HMSDGLLSVH SITDNQVNLN FEIEKLRAEL KHVQEMYAMA QTETVGASKK LTELNQRRFE
401: ESEKLVELKE KEEVAKDTAS KEKQRYEEAM KEAEKVKELM MKEALHRREA EFKAERDARE KDKLQASLVS PGVQYQHYTW EEIAAATSDF AENLKIGIGA
501: YGSVYKCNLH HTTGAVKVLH AGETQLSKQF DQELEILSKI RHPHLVLLLG ACPERGCLVY EYMDNGSLDD RLMLVNDTPP IPWFERFRIA LEVASALVFL
601: HKSKPRPIIH RDLKPGNILL DHNFVSKLGD VGLSTMVNQD DVSSRTIFKQ TSPVGTLCYI DPEYQRTGII SPKSDVYSLG VVILQLITAK PAIAITHMVE
701: EAIGDDAEFM AILDKKAGSW PISDTRELAA LGLCCTEMRR RDRPDLKDQI IPALERLRKV ADKAQNLLSR TPSGPPSHFI CPLLKGVMNE PCVAADGYTY
801: DREAIEEWLR QKDTSPVTNL PLPNKNLIAN YTLYSAIMEW KSNKR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)