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AT5G61480.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.949
What is SUBAcon?
What is ASURE?
SUBAcon computations
Predictors External Curations
AmiGO : plasma membrane 17317660
SwissProt : plasma membrane 16381842
TAIR : plasma membrane 17317660
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
PHLOEM INTERCALATED WITH XYLEM (PXY); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT4G28650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G61480-MONOMERBioGrid:21513DIP:DIP-46414NEC:2.7.11.1eggNOG:COG4886eggNOG:ENOG410IJBEEMBL:AB012239
EMBL:AB016887EMBL:CP002688EMBL:FJ708809EnsemblPlants:AT5G61480EnsemblPlants:AT5G61480.1entrez:836269Gene3D:3.80.10.10
GeneID:836269Genevisible:Q9FII5GO:GO:0001944GO:GO:0004674GO:GO:0005524GO:GO:0005886GO:GO:0010067
GO:GO:0010089GO:GO:0010223GO:GO:0016021GO:GO:0051301Gramene:AT5G61480.1hmmpanther:PTHR27000hmmpanther:PTHR27000:SF1
HOGENOM:HOG000116551InParanoid:Q9FII5InterPro:IPR000719InterPro:IPR001611InterPro:IPR003591InterPro:IPR008271InterPro:IPR011009
InterPro:IPR013210InterPro:IPR017441InterPro:IPR032675KEGG:ath:AT5G61480OMA:ILFDNRFPaxDb:Q9FII5Pfam:PF00069
Pfam:PF00560Pfam:PF08263Pfam:PF13855Pfam:Q9FII5Pfscan:PS50011PhylomeDB:Q9FII5PRIDE:Q9FII5
PRO:PR:Q9FII5PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:Q9FII5Proteomes:UP000006548RefSeq:NP_200956.1
scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMART:SM00369SMR:Q9FII5STRING:3702.AT5G61480.1SUPFAM:SSF52047
SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT5G61480tair10-symbols:PXYTMHMM:TMhelixUniGene:At.55662UniProt:Q9FII5
Coordinates (TAIR10) chr5:-:24724541..24727842
Molecular Weight (calculated) 114685.00 Da
IEP (calculated) 6.83
GRAVY (calculated) -0.07
Length 1041 amino acids
Sequence (TAIR10)
(BLAST)
0001: MKKKNISPSL VLHPLLLLLL PFFAFNSLAL KFSPQLLSLL SLKTSLSGPP SAFQDWKVPV NGQNDAVWCS WSGVVCDNVT AQVISLDLSH RNLSGRIPIQ
0101: IRYLSSLLYL NLSGNSLEGS FPTSIFDLTK LTTLDISRNS FDSSFPPGIS KLKFLKVFNA FSNNFEGLLP SDVSRLRFLE ELNFGGSYFE GEIPAAYGGL
0201: QRLKFIHLAG NVLGGKLPPR LGLLTELQHM EIGYNHFNGN IPSEFALLSN LKYFDVSNCS LSGSLPQELG NLSNLETLFL FQNGFTGEIP ESYSNLKSLK
0301: LLDFSSNQLS GSIPSGFSTL KNLTWLSLIS NNLSGEVPEG IGELPELTTL FLWNNNFTGV LPHKLGSNGK LETMDVSNNS FTGTIPSSLC HGNKLYKLIL
0401: FSNMFEGELP KSLTRCESLW RFRSQNNRLN GTIPIGFGSL RNLTFVDLSN NRFTDQIPAD FATAPVLQYL NLSTNFFHRK LPENIWKAPN LQIFSASFSN
0501: LIGEIPNYVG CKSFYRIELQ GNSLNGTIPW DIGHCEKLLC LNLSQNHLNG IIPWEISTLP SIADVDLSHN LLTGTIPSDF GSSKTITTFN VSYNQLIGPI
0601: PSGSFAHLNP SFFSSNEGLC GDLVGKPCNS DRFNAGNADI DGHHKEERPK KTAGAIVWIL AAAIGVGFFV LVAATRCFQK SYGNRVDGGG RNGGDIGPWK
0701: LTAFQRLNFT ADDVVECLSK TDNILGMGST GTVYKAEMPN GEIIAVKKLW GKNKENGKIR RRKSGVLAEV DVLGNVRHRN IVRLLGCCTN RDCTMLLYEY
0801: MPNGSLDDLL HGGDKTMTAA AEWTALYQIA IGVAQGICYL HHDCDPVIVH RDLKPSNILL DADFEARVAD FGVAKLIQTD ESMSVVAGSY GYIAPEYAYT
0901: LQVDKKSDIY SYGVILLEII TGKRSVEPEF GEGNSIVDWV RSKLKTKEDV EEVLDKSMGR SCSLIREEMK QMLRIALLCT SRSPTDRPPM RDVLLILQEA
1001: KPKRKTVGDN VIVVGDVNDV NFEDVCSVDV GHDVKCQRIG V
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)