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AT5G61450.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:COG2074eggNOG:ENOG410IG3KEMBL:AB016887EMBL:CP002688
EnsemblPlants:AT5G61450EnsemblPlants:AT5G61450.1entrez:836266Gene3D:3.40.50.300
GeneID:836266GO:GO:0016787Gramene:AT5G61450.1hmmpanther:PTHR33477
hmmpanther:PTHR33477:SF2InterPro:IPR027417KEGG:ath:AT5G61450OMA:INNGEHE
Pfam:PF13207Proteomes:UP000006548RefSeq:NP_200953.1SMR:Q9FII8
SUPFAM:SSF52540TAIR:AT5G61450UniGene:At.8629UniProt:Q9FII8
Coordinates (TAIR10) chr5:-:24710240..24712882
Molecular Weight (calculated) 50075.10 Da
IEP (calculated) 6.52
GRAVY (calculated) -0.61
Length 447 amino acids
Sequence (TAIR10)
(BLAST)
001: MKDREESSSS SSSMTTKKTN GIINNGEHEP RDINIRSFSS VPSSPRNASS KYDFVKVKVW LGDNADHYYV LSRFLVCRML TVTKIPNHEA IKISLELKKL
101: LIDNSLLDVS QSDLETNLFK LMERRGYGEE YINRYNMMTK FHHQRVPLVI LVCGTACVGK STIATQLAQR LNLPNVLQTD MVYELLRTAT DAPLTSTPVW
201: TREFGSSEEL ITEFCRECRI VRKGLGGDLK KAMKDGKPII IEGRHLDPSI YLMNDENKTP SNDPEKSSSE TNSSKDLTSD KNPEASSSNT KETDNSAVKP
301: HSHEEAVASV EANNLSEKVT QCTIDAESSK DAEKKSKSAD GSGKTKSGPE PIVISIVLKM SEFDHKALLE EWISSRTSGE KYTTKEKDRL ITNLKTIEDY
401: LCSFNSQGVT VVNISATTFP QTLDWLHNYL LQRIEEGIRS SENEAPK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)