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AT5G61440.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : atypical CYS HIS rich thioredoxin 5
Curator
Summary (TAIR10)
Encodes a member of the thioredoxin family protein. Located in the chloroplast.
Computational
Description (TAIR10)
atypical CYS HIS rich thioredoxin 5 (ACHT5); INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: atypical CYS HIS rich thioredoxin 4 (TAIR:AT1G08570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0526eggNOG:KOG0907EMBL:AB010073EMBL:AF144389
EMBL:AK229043EMBL:BT024467EMBL:CP002688EnsemblPlants:AT5G61440
EnsemblPlants:AT5G61440.1entrez:836265Gene3D:3.40.30.10GeneID:836265
Genevisible:Q9XFI1GO:GO:0000103GO:GO:0006457GO:GO:0006662
GO:GO:0009507GO:GO:0015035GO:GO:0016671GO:GO:0034599
GO:GO:0045454GO:GO:0055114Gramene:AT5G61440.1hmmpanther:PTHR10438
hmmpanther:PTHR10438:SF263HOGENOM:HOG000240027InParanoid:Q9XFI1InterPro:IPR005746
InterPro:IPR012336InterPro:IPR013766KEGG:ath:AT5G61440OMA:CTIATIN
PANTHER:PTHR10438PaxDb:Q9XFI1Pfam:PF00085Pfam:Q9XFI1
Pfscan:PS51352PhylomeDB:Q9XFI1PRIDE:Q9XFI1PRO:PR:Q9XFI1
PROSITE:PS51352ProteinModelPortal:Q9XFI1Proteomes:UP000006548RefSeq:NP_200952.1
SMR:Q9XFI1STRING:3702.AT5G61440.1SUPFAM:SSF52833TAIR:AT5G61440
tair10-symbols:ACHT5UniGene:At.20695UniProt:Q9XFI1
Coordinates (TAIR10) chr5:+:24707658..24708684
Molecular Weight (calculated) 26891.20 Da
IEP (calculated) 7.77
GRAVY (calculated) -0.25
Length 245 amino acids
Sequence (TAIR10)
(BLAST)
001: MDAISSLGTN CVLSGVSPFS QENQSKSKLS PFMSLDLKEH PMASADFTNQ TLTAFSSSSA SPFQAKTSSI GMSRGMRWWE KSTNHNMLEI QSANHLVDSL
101: LNAGDRLVVL DFYSPGCGGC KSLHPKICQL AETNPNVMFL KVNQEELRTM CHGLNVHVLP FFKFYRGAEG KVCSFSCTIA TINKFKKALD KHGSERCSLG
201: DAKGLDEKEL AALASVGELK MNSLTMHQAS NIGYKTEEQY QTMVL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)