AT5G60620.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : glycerol-3-phosphate acyltransferase 9 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Glycerol-3-phosphate acyltransferase localized to the ER. Similar to mammalian cells involved in storage oil formation. | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
glycerol-3-phosphate acyltransferase 9 (GPAT9); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: triglyceride biosynthetic process, diacylglycerol biosynthetic process, metabolic process; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: Phospholipid/glycerol acyltransferase family protein (TAIR:AT1G80950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:24367266..24369647 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 43022.40 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.67 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.04 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 376 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSSTAGRLVT SKSELDLDHP NIEDYLPSGS SINEPRGKLS LRDLLDISPT LTEAAGAIVD DSFTRCFKSN PPEPWNWNIY LFPLYCFGVV VRYCILFPLR 101: CFTLAFGWII FLSLFIPVNA LLKGQDRLRK KIERVLVEMI CSFFVASWTG VVKYHGPRPS IRPKQVYVAN HTSMIDFIVL EQMTAFAVIM QKHPGWVGLL 201: QSTILESVGC IWFNRSEAKD REIVAKKLRD HVQGADSNPL LIFPEGTCVN NNYTVMFKKG AFELDCTVCP IAIKYNKIFV DAFWNSRKQS FTMHLLQLMT 301: SWAVVCEVWY LEPQTIRPGE TGIEFAERVR DMISLRAGLK KVPWDGYLKY SRPSPKHSER KQQSFAESIL ARLEEK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)