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AT5G59780.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : myb domain protein 59
Curator
Summary (TAIR10)
Encodes a putative transcription factor (MYB59).
Computational
Description (TAIR10)
myb domain protein 59 (MYB59); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 48 (TAIR:AT3G46130.3); Has 5767 Blast hits to 5764 proteins in 359 species: Archae - 0; Bacteria - 0; Metazoa - 308; Fungi - 94; Plants - 4827; Viruses - 3; Other Eukaryotes - 535 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT5G59780EnsemblPlants:AT5G59780.1entrez:836099hmmpanther:PTHR10641hmmpanther:PTHR10641:SF484Pfam:PF00249Pfscan:PS51294
tair10-symbols:ATMYB59tair10-symbols:ATMYB59-1tair10-symbols:MYB59
Coordinates (TAIR10) chr5:-:24082425..24083044
Molecular Weight (calculated) 19482.60 Da
IEP (calculated) 6.27
GRAVY (calculated) -0.98
Length 170 amino acids
Sequence (TAIR10)
(BLAST)
001: MTPQEERLVL ELHAKWGNRW SKIARKLPGR TDNEIKNYWR THMRKKAQEK KRPMSPTSSS SNCCSSSMTT TTSQDTGGSN GKMNQECEDG YYSMDDIWRE
101: IDQSGANVIK PVKDNYYSEQ SCYLNFPPLA SPTWESSLES IWNMDADESK MSSFAIDQFP LSFEHGSGRL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)