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AT5G59670.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
What is ASURE?
SUBAcon computations
Predictors External Curations
SwissProt : plasma membrane 16381842
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G59670-MONOMERBioGrid:21332EC:2.7.10.1EC:2.7.11.1eggNOG:COG0515eggNOG:ENOG410IF1SEMBL:AB006705
EMBL:AY099606EMBL:BT008803EMBL:CP002688EMBL:FJ708807EnsemblPlants:AT5G59670EnsemblPlants:AT5G59670.1entrez:836088
Gene3D:2.60.120.200Gene3D:3.80.10.10GeneID:836088Genevisible:Q9FN94GO:GO:0004674GO:GO:0004714GO:GO:0005524
GO:GO:0005886GO:GO:0016021Gramene:AT5G59670.1hmmpanther:PTHR27003HOGENOM:HOG000116550InParanoid:Q9FN94InterPro:IPR000719
InterPro:IPR001245InterPro:IPR001611InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320InterPro:IPR017441InterPro:IPR024788
InterPro:IPR032675KEGG:ath:AT5G59670OMA:QNTSEWIPaxDb:Q9FN94Pfam:PF07714Pfam:PF12819Pfam:PF13855
Pfam:Q9FN94Pfscan:PS50011PhylomeDB:Q9FN94PRIDE:Q9FN94PRO:PR:Q9FN94PROSITE:PS00107PROSITE:PS00108
PROSITE:PS50011ProteinModelPortal:Q9FN94Proteomes:UP000006548RefSeq:NP_200775.2scanprosite:PS00107scanprosite:PS00108SMART:SM00220
SMR:Q9FN94STRING:3702.AT5G59670.1SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT5G59670TMHMM:TMhelixUniGene:At.29210
UniProt:Q9FN94
Coordinates (TAIR10) chr5:+:24041538..24045478
Molecular Weight (calculated) 97037.40 Da
IEP (calculated) 8.37
GRAVY (calculated) -0.21
Length 868 amino acids
Sequence (TAIR10)
(BLAST)
001: MESSFGLLLA LLTLTIIHIV QAQDPQGFIS LDCGLPANET SPYTETQTGL LFSSDATFIQ SGKTGRVQAN QESKFLKPYR TLRYFPEGVR NCYNLSVFKE
101: RKYLIAASFL YGNYDGHNIA PVFDLYLGPN LWAKIDLQDV NGTGEEILHI PTSNSLQICL VQTGETTPLI SSLELRPMRT GSYTTVSGSL KTYRRLYFKK
201: SGSRLRYSKD VYDRSWFPRF MDEWTQISTA LGVINTNIYQ PPEDALKNAA TPTDASAPLT FKWNSEKLDV QYYFYAHYAE IQDLQANDTR EFNILLNGQN
301: LSVTGPEVPD KLSIKTFQSS SPISCNGWAC NFQLIRTKRS TLPPLLNALE VYTVIQFPRS ETDESDVVAM KNISASYGLS RINWQGDPCF PQQLRWDALD
401: CTNRNISQPP RITSLNLSSS RLNGTIAAAI QSITQLETLD LSYNNLTGEV PEFLGKMKSL SVINLSGNNL NGSIPQALRK KRLKLYLEGN PRLIKPPKKE
501: FPVAIVTLVV FVTVIVVLFL VFRKKMSTIV KGLRLPPRTS MVDVTFSNKK SKRFTYSEVV QVTKNFQRVL GKGGFGMVYH GTVKGSEQVA VKVLSQSSTQ
601: GSKEFKAEVD LLLRVHHTNL VSLVGYCCEG DYLALVYEFL PNGDLKQHLS GKGGNSIINW SIRLRIALEA ALGLEYLHIG CTPPMVHRDV KTANILLDEN
701: FKAKLADFGL SRSFQGEGES QESTTIAGTL GYLDPECYHS GRLGEKSDVY SFGIVLLEMI TNQPVINQTS GDSHITQWVG FQMNRGDILE IMDPNLRKDY
801: NINSAWRALE LAMSCAYPSS SKRPSMSQVI HELKECIACE NTGISKNRSL EYQEMNVSLD TTAVPMAR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)