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AT5G59500.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 0.602
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferases
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferases; FUNCTIONS IN: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity; INVOLVED IN: C-terminal protein amino acid methylation; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Isoprenylcysteine carboxyl methyltransferase (InterPro:IPR007269); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:COG2020eggNOG:KOG2628EMBL:AB025604EMBL:BT002357EMBL:CP002688EnsemblPlants:AT5G59500EnsemblPlants:AT5G59500.1
entrez:836069GeneID:836069GO:GO:0008168GO:GO:0016021Gramene:AT5G59500.1hmmpanther:PTHR12714hmmpanther:PTHR12714:SF11
InterPro:IPR007318KEGG:00564+2.1.1.17KEGG:ath:AT5G59500OMA:PPAYFNGPfam:PF04191PhylomeDB:Q9LTI0Proteomes:UP000006548
RefSeq:NP_200758.1STRING:3702.AT5G59500.1TAIR:AT5G59500TMHMM:TMhelixUniGene:At.29222unipathway:UPA00753UniProt:Q9LTI0
Coordinates (TAIR10) chr5:+:23986024..23987214
Molecular Weight (calculated) 45795.10 Da
IEP (calculated) 9.76
GRAVY (calculated) 0.24
Length 396 amino acids
Sequence (TAIR10)
(BLAST)
001: MEAVLLCSKL VPRAASLEGN QKFSFRHLNK HLKCNSLRAD SRDTPLLRGF EAIKSPSIWS CAPFPVRKGS WVPPRCSISS STVSDSDNPF LSQFRTFSFG
101: SMVKKVRELK VKPMDVVKLT LLLSILTVAA KKTLTLVLDP FFWMYFSWTW LFWPWFIAVG LAGYGIYCFR KHWLGEANAF EQLGIVTSVF TWLTLVPPAY
201: FNGYLEGWPY VFFLAYHYFF FFNVSVRKRL YGDFYARTHD PKWDVNTPLW SRILFGVGIM VGHWLAAFEG PELHRLPGGW ANVGIWILIV ITMLMHYDST
301: LYLARYSEKV VVPTAVVQFG PYRWVRHPIY ASTMLLFAAY CTALRAPLSL LFLLAVCLVY YNKKAKMEEE LMVESFGQSY SDYADKVRHK FIPFVY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)