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AT5G59305.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JS6ReggNOG:ENOG411184GEMBL:AB016890EMBL:AB241063EMBL:AY085895EMBL:BT026400EMBL:CP002688
EMBL:DQ447094EMBL:DQ653382EnsemblPlants:AT5G59305EnsemblPlants:AT5G59305.1entrez:836049GeneID:836049Genevisible:Q8LDN4
GO:GO:0005615GO:GO:0007275GO:GO:0045168Gramene:AT5G59305.1HOGENOM:HOG000148665InParanoid:Q8LDN4KEGG:ath:AT5G59305
OMA:FKIGPAKPaxDb:Q8LDN4Pfam:Q8LDN4PhylomeDB:Q8LDN4PRO:PR:Q8LDN4Proteomes:UP000006548RefSeq:NP_568903.1
STRING:3702.AT5G59305.1TAIR:AT5G59305UniGene:At.29234UniProt:Q8LDN4
Coordinates (TAIR10) chr5:+:23923232..23923679
Molecular Weight (calculated) 8850.09 Da
IEP (calculated) 11.20
GRAVY (calculated) -0.53
Length 76 amino acids
Sequence (TAIR10)
(BLAST)
1: MRRHDIIIKL LLLMCLLLSR FVTRECQEVH FKIGPAKIIA KPNNARVMPT WGEEKKWHKH PSGPNPTGNR HPPVKH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)