AT5G59260.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Concanavalin A-like lectin protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT5G59270.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:23907901..23909925 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 74488.40 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.56 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.08 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 674 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAGVLGSVVF WLIIGIHVTF LVFAQEGDHF VYYDFRNADL ELDGMANTNH GPLHLTNNTN TGTGHAFYNI PIKFTASSLS SFSFSTEFVF AIFPLQKSTY 101: GHGMAFVVSP TKDLRSNGSA NSNLGIFNRA NDNKTATHIF AVELDTNQNS ESFDKGGNDV GIDINSIVSV ESADASYFNA RKGKNISLPL ASGKSILVWI 201: DYDGIEKVLN VTLAPVQTPK PDSPYFSSFI KPKVPLLSRS INLSEIFTET MYVGFSGSTG SIKSNQYILG WSFKQGGKAE SLDISRLSNP PPSPKRFPLK 301: EVLGATISTI AFLTLGGIVY LYKKKKYAEV LEQWEKEYSP QRYSFRILYK ATKGFRENQL LGAGGFGKVY KGILPSGTQI AVKRVYHDAE QGMKQYVAEI 401: ASMGRLRHKN LVHLLGYCRR KGELLLVYDY MPNGSLDDYL FHKNKLKDLT WSQRVNIIKG VASALLYLHE EWEQVVLHRD IKASNILLDA DLNGKLGDFG 501: LARFHDRGVN LEATRVVGTI GYMAPELTAM GVTTTCTDVY AFGAFILEVV CGRRPVDPDA PREQVILVKW VASCGKRDAL TDTVDSKLID FKVEEAKLLL 601: KLGMLCSQIN PENRPSMRQI LQYLEGNVSV PAISFGTVAL GIPNISHETV TQMTTTSSSA NFSFEDVTVL FGGR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)