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AT5G59220.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : highly ABA-induced PP2C gene 1
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
highly ABA-induced PP2C gene 1 (HAI1); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: response to water deprivation, response to abscisic acid stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: highly ABA-induced PP2C gene 2 (TAIR:AT1G07430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G59220-MONOMERBioGrid:21284BRENDA:3.1.3.16DIP:DIP-48992NEC:3.1.3.16eggNOG:COG0631eggNOG:KOG0698
EMBL:AB016890EMBL:AF428395EMBL:AY054163EMBL:AY074555EMBL:CP002688EnsemblPlants:AT5G59220EnsemblPlants:AT5G59220.1
entrez:836040Gene3D:3.60.40.10GeneID:836040Genevisible:Q9FIF5GO:GO:0004722GO:GO:0005634GO:GO:0005794
GO:GO:0005829GO:GO:0009414GO:GO:0009658GO:GO:0009737GO:GO:0009788GO:GO:0010118GO:GO:0010150
GO:GO:0033106GO:GO:0046872Gramene:AT5G59220.1hmmpanther:PTHR13832hmmpanther:PTHR13832:SF219HOGENOM:HOG000233896InParanoid:Q9FIF5
IntAct:Q9FIF5InterPro:IPR001932InterPro:IPR015655iPTMnet:Q9FIF5KEGG:ath:AT5G59220KO:K14497OMA:KFVSGEQ
PANTHER:PTHR13832PaxDb:Q9FIF5Pfam:PF00481Pfam:Q9FIF5Pfscan:PS51746PhylomeDB:Q9FIF5PRIDE:Q9FIF5
PRO:PR:Q9FIF5PROSITE:PS51746ProteinModelPortal:Q9FIF5Proteomes:UP000006548RefSeq:NP_200730.1SMART:SM00331SMART:SM00332
SMR:Q9FIF5STRING:3702.AT5G59220.1SUPFAM:SSF81606TAIR:AT5G59220tair10-symbols:HAI1UniGene:At.22149UniProt:Q9FIF5
Coordinates (TAIR10) chr5:-:23894672..23896497
Molecular Weight (calculated) 45540.10 Da
IEP (calculated) 6.41
GRAVY (calculated) -0.31
Length 413 amino acids
Sequence (TAIR10)
(BLAST)
001: MAEICYENET MMIETTATVV KKATTTTRRR ERSSSQAARR RRMEIRRFKF VSGEQEPVFV DGDLQRRRRR ESTVAASTST VFYETAKEVV VLCESLSSTV
101: VALPDPEAYP KYGVASVCGR RREMEDAVAV HPFFSRHQTE YSSTGFHYCG VYDGHGCSHV AMKCRERLHE LVREEFEADA DWEKSMARSF TRMDMEVVAL
201: NADGAAKCRC ELQRPDCDAV GSTAVVSVLT PEKIIVANCG DSRAVLCRNG KAIALSSDHK PDRPDELDRI QAAGGRVIYW DGPRVLGVLA MSRAIGDNYL
301: KPYVISRPEV TVTDRANGDD FLILASDGLW DVVSNETACS VVRMCLRGKV NGQVSSSPER EMTGVGAGNV VVGGGDLPDK ACEEASLLLT RLALARQSSD
401: NVSVVVVDLR RDT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)