AT5G59190.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : subtilase family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: response to cadmium ion, proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: central cell, root; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Peptidase S8, subtilisin-related (InterPro:IPR015500), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT3G46850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr5:+:23885855..23888673 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 74376.80 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.88 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.11 | ||||||||||||||||||||||||||||||||||||||||
| Length | 693 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGTLPEIKYS PPSHHLSILQ KLVGTIAASH LLVRSYKRSF NGFAANLSQA ESQKLQNMKE VVSVFPSKSH ELTTTRSWDF VGFGEKARRE SVKESDVIVG 101: VIDSGIWPES ESFDDEGFGP PPKKWKGSCK GGLKFACNNK LIGARFYNKF ADSARDEEGH GTHTASTAAG NAVQAASFYG LAQGTARGGV PSARIAAYKV 201: CFNRCNDVDI LAAFDDAIAD GVDVISISIS ADYVSNLLNA SVAIGSFHAM MRGIITAGSA GNNGPDQGSV ANVSPWMITV AASGTDRQFI DRVVLGNGKA 301: LTGISVNTFN LNGTKFPIVY GQNVSRNCSQ AQAGYCSSGC VDSELVKGKI VLCDDFLGYR EAYLAGAIGV IVQNTLLPDS AFVVPFPASS LGFEDYKSIK 401: SYIESAEPPQ AEILRTEEIV DREAPYVPSF SSRGPSFVIQ NLLKPDVSAP GLEILAAFSP VASPSSFLNP EDKRSVRYSV MSGTSMACPH VAGVAAYVKS 501: FHPDWSPSAI KSAIMTTATP MNLKKNPEQE FAYGSGQINP TKASDPGLVY EVETEDYLKM LCAEGFDSTT LTTTSGQNVT CSERTEVKDL NYPTMTTFVS 601: SLDPFNVTFK RTVTNVGFPN STYKASVVPL QPELQISIEP EILRFGFLEE KKSFVVTISG KELKDGSFVS SSVVWSDGSH SVRSPIVAYS IQP |
||||||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)