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AT5G59130.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:16356755 (2006): extracellular region
  • PMID:15694452 (2005): extracellular region
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Subtilase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: subtilase 4.13 (TAIR:AT5G59120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G59130-MONOMERBioCyc:ARA:GQT-1824-MONOMEREC:3.4.21.-eggNOG:COG1404EMBL:AB016890EMBL:BT003861EMBL:CP002688
EnsemblPlants:AT5G59130EnsemblPlants:AT5G59130.1entrez:836031Gene3D:3.40.50.200GeneID:836031GO:GO:0004252GO:GO:0005576
Gramene:AT5G59130.1hmmpanther:PTHR10795hmmpanther:PTHR10795:SF399HOGENOM:HOG000238262InterPro:IPR000209InterPro:IPR010259InterPro:IPR015500
InterPro:IPR023828MEROPS:S08.A15OMA:DGSDWAQPANTHER:PTHR10795Pfam:PF00082Pfam:PF05922PRIDE:Q9FIG1
PRINTS:PR00723PROSITE:PS00138ProteinModelPortal:Q9FIG1Proteomes:UP000006548RefSeq:NP_568899.1scanprosite:PS00138STRING:3702.AT5G59130.1
SUPFAM:SSF52743TAIR:AT5G59130TMHMM:TMhelixUniGene:At.29243UniProt:F4KHS8
Coordinates (TAIR10) chr5:-:23870192..23873691
Molecular Weight (calculated) 78466.30 Da
IEP (calculated) 8.95
GRAVY (calculated) -0.06
Length 732 amino acids
Sequence (TAIR10)
(BLAST)
001: MAKRGAFSSF HSFLIVLLFL NSVLAVTHGH QDKQVYIVYM GSLPSRADYT PMSHHMNILQ EVARESSIEG RLVRSYKRSF NGFVARLTES ERERVAVVSV
101: FPNKKLKLQT SASWDFMGLK EGKGTKRNPS VESDTIIGVF DGGIWPESES FSDKGFGPPP KKWKGICAGG KNFTCNNKLI GARHYSPGDA RDSTGHGTHT
201: ASIAAGNAVA NTSFFGIGNG TVRGAVPASR IAVYRVCAGE CRDDAILSAF DDAISDGVDI ITISIGDINV YPFEKDPIAI GAFHAMSKGI LTVNAAGNTG
301: PDTASITSLA PWLLTVAAST ANREFVSKVV LGDGKTLVGK SVNGFDLKGK KFPLVYGKSA ALSLSQAKCA EDCTPECLDA SLVKGKILVC NRFLPYVAYT
401: KRAVAAIFED GSDWAQINGL PVSGLQKDDF ESVLSYFKSE KSPEAAVLKS ESIFYQTAPK ILSFSSRGPN IIVADILKPD ITAPGLEILA ANSLRASPFY
501: DTAYVKYSVE SGTSMSCPHA AGVAAYVKTF HPQWSPSMIK SAIMTTAWSM NASQSGYAST EFAYGAGHVD PIAATNPGLV YEITKTDYFA FLCGMNYNKT
601: TVKLISGEAV TCSEKISPRN LNYPSMSAKL SGSNISFIVT FNRTVTNVGT PNSTYKSKVV LNHGSKLNVK VSPSVLSMKS MNEKQSFTVT VSASELHSEL
701: PSSANLIWSD GTHNVRSPIV VYTGDFSQPS SS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)