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AT5G59090.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:24665109 (2014): extracellular region plant-type cell wall
  • PMID:16729891 (2006): extracellular region
  • PMID:16356755 (2006): extracellular region
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : subtilase 4.12
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
subtilase 4.12 (SBT4.12); FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: apoplast, nucleus, cytoplasm; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: subtilase 4.13 (TAIR:AT5G59120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G59090-MONOMEREC:3.4.21.-eggNOG:COG1404EMBL:AB024027EMBL:AY136334EMBL:BT000127EMBL:CP002688
EnsemblPlants:AT5G59090EnsemblPlants:AT5G59090.1entrez:836026ExpressionAtlas:Q8L7D2Gene3D:3.40.50.200GeneID:836026GO:GO:0004252
GO:GO:0005576GO:GO:0005618GO:GO:0005634GO:GO:0005737GO:GO:0009753hmmpanther:PTHR10795hmmpanther:PTHR10795:SF399
HOGENOM:HOG000238262InterPro:IPR000209InterPro:IPR010259InterPro:IPR015500InterPro:IPR023828iPTMnet:Q8L7D2MEROPS:S08.A20
OMA:SSACDAKPANTHER:PTHR10795Pfam:PF00082Pfam:PF05922PhylomeDB:Q8L7D2PRINTS:PR00723PROSITE:PS00138
Proteomes:UP000006548RefSeq:NP_568895.1scanprosite:PS00138SMR:Q8L7D2STRING:3702.AT5G59090.1SUPFAM:SSF52743TAIR:AT5G59090
tair10-symbols:ATSBT4.12tair10-symbols:SBT4.12UniGene:At.25250UniProt:Q8L7D2
Coordinates (TAIR10) chr5:-:23852125..23855235
Molecular Weight (calculated) 78101.20 Da
IEP (calculated) 9.33
GRAVY (calculated) -0.03
Length 736 amino acids
Sequence (TAIR10)
(BLAST)
001: MANLAASTCL YSWLLVLLLS SVSAIIDEDT QVYIVYMGSL SSRADYIPTS DHMSILQQVT GESSIEGRLV RSYKRSFNGF AARLTESERT LIAEIEGVVS
101: VFPNKILQLH TTTSWDFMGV KEGKNTKRNL AIESDTIIGV IDTGIWPESK SFSDKGFGPP PKKWKGVCSG GKNFTCNNKL IGARDYTSEG TRDTSGHGTH
201: TASTAAGNAV KDTSFFGIGN GTVRGGVPAS RIAAYKVCTD SGCSSEALLS SFDDAIADGV DLITISIGFQ FPSIFEDDPI AIGAFHAMAK GILTVSSAGN
301: SGPKPTTVSH VAPWIFTVAA STTNRGFITK VVLGNGKTLA GRSVNAFDMK GKKYPLVYGK SAASSACDAK TAALCAPACL NKSRVKGKIL VCGGPSGYKI
401: AKSVGAIAII DKSPRPDVAF THHLPASGLK AKDFKSLVSY IESQDSPQAA VLKTETIFNR TSPVIASFSS RGPNTIAVDI LKPDITAPGV EILAAFSPNG
501: EPSEDDTRRV KYSVFSGTSM ACPHVAGVAA YVKTFYPRWS PSMIQSAIMT TAWPVKAKGR GIASTEFAYG AGHVDPMAAL NPGLVYELDK ADHIAFLCGM
601: NYTSKTLKII SGDTVKCSKK NKILPRNLNY PSMSAKLSGT DSTFSVTFNR TLTNVGTPNS TYKSKVVAGH GSKLSIKVTP SVLYFKTVNE KQSFSVTVTG
701: SDVDSEVPSS ANLIWSDGTH NVRSPIVVYI MVVDEA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)