suba logo
AT5G59010.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase protein with tetratricopeptide repeat domain
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT3G54030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G59010-MONOMERBioCyc:ARA:GQT-601-MONOMEReggNOG:ENOG410IVG3eggNOG:ENOG410XQTVEMBL:AB016885EMBL:AY075600EMBL:BT026380
EMBL:CP002688EnsemblPlants:AT5G59010EnsemblPlants:AT5G59010.1entrez:836018ExpressionAtlas:Q9FIL1Gene3D:1.25.40.10GeneID:836018
GO:GO:0004672GO:GO:0005524GO:GO:0005886GO:GO:0009506Gramene:AT5G59010.1hmmpanther:PTHR27001hmmpanther:PTHR27001:SF18
HOGENOM:HOG000239695IntAct:Q9FIL1InterPro:IPR000719InterPro:IPR001245InterPro:IPR011009InterPro:IPR011990OMA:FTEFSFD
Pfam:PF07714Pfam:PF13414Pfscan:PS50011PhylomeDB:Q9FIL1PROSITE:PS50011Proteomes:UP000006548RefSeq:NP_200709.2
SMR:Q9FIL1STRING:3702.AT5G59010.1SUPFAM:SSF48452SUPFAM:SSF56112SwissPalm:Q9FIL1TAIR:AT5G59010UniGene:At.21094
UniProt:Q9FIL1
Coordinates (TAIR10) chr5:-:23820578..23823099
Molecular Weight (calculated) 54857.10 Da
IEP (calculated) 6.03
GRAVY (calculated) -0.35
Length 489 amino acids
Sequence (TAIR10)
(BLAST)
001: MGPRCSKLSL CWWPTHLKST HNEASDLDNG TDDLPSFTEF SFDQLRAATC GFSTDSIVSE HGVKAPNVVY KGRLEDDRWI AVKRFNRSAW PDTRQFLEEA
101: KAVGQLRNER LANLIGFCCE GDERLLVAEF MPFETLSKHL FHWDSQPMKW SMRLRVALYL AQALEYCSSK GRALYHDLNA YRILFDQDGN PRLSCFGLMK
201: NSRDGKSYST NLAFTPPEYL RTGRVIPESV VYSFGTLLLD LLSGKHIPPS HALDLIRGKN FLMLMDSCLD GHFSNDDGTD LVRLASRCLQ YEARERPNVK
301: SLVSSLAPLQ KETDIPSHVL MGIPHGAASP KETTSLTPLG DACSRHDLTA IHEILEKVGY KDDEGVANEL SFQVWTDQIQ ETLNSKKQGD AAFKGKDFVT
401: AVECYTQFIE DGTMVSPTVF ARRCLCYLMS NMPQEALGDA MQAQVVSPEW PTAFYLQAAA LFSLGMDKDA CETLKDGTSL EAKKHNNRN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)