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AT5G58940.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.893
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : calmodulin-binding receptor-like cytoplasmic kinase 1
Curator
Summary (TAIR10)
Arabidopsis thaliana calmodulin-binding receptor-like kinase mRNA
Computational
Description (TAIR10)
calmodulin-binding receptor-like cytoplasmic kinase 1 (CRCK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: calmodulin-binding receptor-like cytoplasmic kinase 2 (TAIR:AT4G00330.1); Has 122529 Blast hits to 121159 proteins in 4751 species: Archae - 123; Bacteria - 14655; Metazoa - 45015; Fungi - 10498; Plants - 33517; Viruses - 482; Other Eukaryotes - 18239 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G58940-MONOMERBioGrid:21255EC:2.7.11.1eggNOG:COG0515eggNOG:KOG1187EMBL:AB016885EMBL:AY568379
EMBL:BT015092EMBL:BT015906EMBL:CP002688EnsemblPlants:AT5G58940EnsemblPlants:AT5G58940.1entrez:836011GeneID:836011
Genevisible:Q9FIL7GO:GO:0004674GO:GO:0004683GO:GO:0005516GO:GO:0005524GO:GO:0005737GO:GO:0009409
GO:GO:0009651GO:GO:0009737GO:GO:0042542Gramene:AT5G58940.1hmmpanther:PTHR27003hmmpanther:PTHR27003:SF63HOGENOM:HOG000116550
InParanoid:Q9FIL7InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441KEGG:ath:AT5G58940OMA:KVSGQYR
PaxDb:Q9FIL7Pfam:PF00069Pfam:Q9FIL7Pfscan:PS50011PhylomeDB:Q9FIL7PRIDE:Q9FIL7PRO:PR:Q9FIL7
PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:Q9FIL7Proteomes:UP000006548RefSeq:NP_200702.2scanprosite:PS00107
scanprosite:PS00108SMART:SM00220SMR:Q9FIL7STRING:3702.AT5G58940.1SUPFAM:SSF56112TAIR:AT5G58940tair10-symbols:CRCK1
UniGene:At.50539UniProt:Q9FIL7
Coordinates (TAIR10) chr5:+:23798659..23800716
Molecular Weight (calculated) 52882.10 Da
IEP (calculated) 10.10
GRAVY (calculated) -0.50
Length 470 amino acids
Sequence (TAIR10)
(BLAST)
001: MPMRSKTPTP LRFSNGKHQR DDSEYSWTDV GTGEKARNVS VLGAIRRAAK KVFVIIFLGQ RKLKPTECRS DPGESSTHDR ESTLSGWTGY SSPSSFGRST
101: ERKVSGQYRF SGSRFQSPGK DSSSSKSWHQ GPVIFSFGEL QRATANFSSV HQIGEGGFGT VFKGKLDDGT IVAIKRARKN NYGKSWLLEF KNEIYTLSKI
201: EHMNLVKLYG FLEHGDEKVI VVEYVANGNL REHLDGLRGN RLEMAERLEI AIDVAHALTY LHTYTDSPII HRDIKASNIL ITNKLRAKVA DFGFARLVSE
301: DLGATHISTQ VKGSAGYVDP DYLRTFQLTD KSDVYSFGVL LVEILTGRRP IELKRPRKDR LTVKWALRRL KDDEAVLIMD PFLKRNRAAI EVAEKMLRLA
401: SECVTPTRAT RPAMKGIAEK LWAIRREMKE TMICSSASNS SCSSTTHSFI GRDSDRYALP RIEDNENSIE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)