AT5G58830.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Subtilisin-like serine endopeptidase family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Subtilisin-like serine endopeptidase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: central cell, embryo, sperm cell; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT5G58840.1); Has 6856 Blast hits to 6210 proteins in 1069 species: Archae - 223; Bacteria - 4024; Metazoa - 48; Fungi - 225; Plants - 1878; Viruses - 0; Other Eukaryotes - 458 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:23755787..23758600 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 75227.30 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.88 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.11 | ||||||||||||||||||||||||||||||||||||||||
| Length | 701 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVKRASFCLL SCLIILFLSS VSAIIYDPQD KQVYVVYMGS LPSQPNYTPM SNHINILQEV TGESYKRSFN GFSALLTESE REGVAEMEGV VSVFRSKNYK 101: LQTTASWDFM GMKEGKNTKR NFAVESDTII GFIDSGIWPE SESFSDKGFG PPPKKWKGVC KGGKNFTCNN KLIGARDYTS EGTRDLQGHG THTTSTAAGN 201: AVADTSFFGI GNGTARGGVP ASRVAAYKVC TITGCSDDNV LSAFDDAIAD GVDLISVSLG GDYPSLYAED TIAIGAFHAM AKGILTVHSA GNAGPNPTTV 301: VSVAPWMLTV AATTTNRRFL TKVVLGNGKT LVGKSVNAFD LKGKKYPLEY GDYLNESLVK GKILVSRYLS GSEVAVSFIT TDNKDYASIS SRPLSVLSQD 401: DFDSLVSYIN STRSPQGSVL KTEAIFNQLS PKVASFSSRG PNTIAVDILK PDISAPGVEI LAAYSPLSLP SEDRRDKRRV KYSVLSGTSM ACPHVTGVAA 501: YIKTFHPDWS PSVIQSAIMT TAWQMNATGT GAESTEFAYG AGHVDPIAAI NPGLVYELNK TDHISFLCGM NYTSKTLKLI SGDAVICSGK TLQRNLNYPS 601: MSAKLSESNS SFTVTFKRTV TNLGTANSTY KSKIVLNHGS KLNVKVSPSV LSMKSLKEKQ SFTVTVSGSN IDPKLPSSAN LIWSDGTHNV RSPIVVYIDG 701: Y |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)