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AT5G58540.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.775
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G07150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G58540-MONOMERBioCyc:ARA:GQT-1226-MONOMEReggNOG:COG0515eggNOG:KOG1187
EMBL:AB025632EMBL:CP002688EnsemblPlants:AT5G58540EnsemblPlants:AT5G58540.1
entrez:835967ExpressionAtlas:Q9FGG7Gene3D:2.60.120.200GeneID:835967
GO:GO:0004672GO:GO:0005524GO:GO:0016021Gramene:AT5G58540.1
hmmpanther:PTHR27001hmmpanther:PTHR27001:SF60HOGENOM:HOG000240929InterPro:IPR000719
InterPro:IPR001245InterPro:IPR011009InterPro:IPR013320OMA:KVDHKNF
Pfam:PF07714Pfscan:PS50011PhylomeDB:Q9FGG7PROSITE:PS50011
Proteomes:UP000006548RefSeq:NP_851216.2SMR:Q9FGG7STRING:3702.AT5G58540.1
SUPFAM:SSF56112TAIR:AT5G58540TMHMM:TMhelixUniGene:At.66678
UniGene:At.9760UniProt:Q9FGG7
Coordinates (TAIR10) chr5:+:23663400..23665182
Molecular Weight (calculated) 53655.50 Da
IEP (calculated) 5.32
GRAVY (calculated) -0.14
Length 484 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSKRRRRFN LRTVFSIIFL TFLPLNLNSQ EIVEVFDSSQ DHFLIQSRVY ANHRSLIDTP LPGKDPALDA SPPSPESAIL KDPLLPPPPP EGNETPSPPR
101: SGVPTQTPET PPAITPLPVP LAPAPSPSPP VSPGTTKKSP KVYMIVGIVG GVFTVSVALI IIFLILTRKI PIKPWTNSGQ LRDDLITDVP RLQLSELQAA
201: CEDFSNVIGS FSDGTIYKGT LSTGAEIAVV SIVAGSRSDW STTMDTQLLQ KMHNLSKVDH KNFLNVIGYC LEEEPFKRML VFEYAPNGSL SEHLHSQYVE
301: HLDWPTRLRI VMGIAYCLEH MHNLNPPILL SNLDSSSVYL TEDNAAKVSD FSVINSIFPS KEGSSSKNLL EPSLLDPHTN VFNFGAVLFE IISGKLPDPD
401: SMLLEPKPTR DIVDPTLKTF QENVVERLLE VVRQCLNPYS DQRPTMREVV VKLREITGIE ADAAMPRLSP RWWTELEIIS TEGN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)