AT5G58520.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.995 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G07140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:23655312..23657943 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 66230.20 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.38 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||||||||||
| Length | 604 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAAALECWSS RAGDGGDPDN DLVDQVLMRT HDRSESVITS LPETSLEVEG STTVFDQSSS AMQKRFQRLS RNVSEAIVSL KNTLNLDSAR DNQSFGGAMT 101: PKAEVSGGGG GRKLVWATVV KNLAKMYPGS QLPEKLVSNL KKHYDSLPFS YSQADFDMKE VFLHVKLIEQ AAGDDNPVFM IQEVSTEEPR GSVLRLTFAC 201: NSFLSWSTMS GVLDSASICC KKIQIFEKKG LTLGVVLLLD QSGQHSLFKT RVENTLKVAT KKPKPTSVKL PFGLCGCQEQ NGGVGELGGV EEESIQHSSR 301: LGIENLNSTI QIQVPLPSSS FAVSVDEWQT IQSGGNEIGK WLLNSDSFEF GDQIGPTSLK GIFRGKRVGI EKLKGCDKGN SYEFELRKDY LELMACGHKS 401: ILQFYGVCID ENHGLCVVTK LMEGGSLHEL MLKNKKLQTK QILRIAIDIA EGLKFVNDHG VAYRDLNTQR ILLDKHGNAC LGNIGIVTAC KSFGEAVEYE 501: TDGYRWLAPE IIAGDPENTT ETWMSNAYSF GMVLWEMVTG EAAYASCSPV QAAVGIAACG LRPEIPKECP QVLRTLMINC WNNSPSKRPN FSHIHNTLLR 601: AVSR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)