AT5G58150.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G24230.1); Has 123029 Blast hits to 76063 proteins in 2552 species: Archae - 68; Bacteria - 12544; Metazoa - 35496; Fungi - 3406; Plants - 61900; Viruses - 119; Other Eukaryotes - 9496 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:23530216..23532573 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 86615.70 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.54 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.04 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 785 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRLSLWGSLL FFSFFVKHLT SLDPNTDAYH LSSFFSAMRL PNSPQAHTFS SLCSWPGVVV CDSSENVLHI SASGLDLSGS IPDNTIGKMS KLQTLDLSGN 101: KITSLPSDLW SLSLLESLNL SSNRISEPLP SNIGNFMSLH TLDLSFNSIS GKIPAAISNL VNLTTLKLHN NDFQFGVPPE LVHCRSLLSI DLSSNRLNES 201: LPVGFGSAFP LLKSLNLSRN LFQGSLIGVL HENVETVDLS ENRFDGHILQ LIPGHKHNWS SLIHLDLSDN SFVGHIFNGL SSAHKLGHLN LACNRFRAQE 301: FPEIGKLSAL HYLNLSRTNL TNIIPREISR LSHLKVLDLS SNNLTGHVPM LSVKNIEVLD LSLNKLDGDI PRPLLEKLAM MQRFNFSFNN LTFCNPNFSQ 401: ETIQRSFINI RNNCPFAAKP IITKGKKVNK KNTGLKIGLG LAISMAFLLI GLLLILVALR VRRKSRTWAT KLAINNTEPN SPDQHDSTTD IKQATQIPVV 501: MIDKPLMKMT LADLKAATFN FDRGTMLWEG KSGPTYGAVL PGGFRAALKV IPSGTTLTDT EVSIAFERLA RINHPNLFPL CGYCIATEQR IAIYEDLDMV 601: NLQSLLHNNG DDSAPWRLRH KIALGTARAL AFLHHGCIPP MVHGEVKAAT ILLDSSQEPR LADFGLVKLL DEQFPGSESL DGYTPPEQER NASPTLESDV 701: YSFGVVLLEL VSGKKPEGDL VNWVRGLVRQ GQGLRAIDPT MQETVPEDEI AEAVKIGYLC TADLPWKRPT MQQVVGLLKD ISPNY |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)