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AT5G57920.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : early nodulin-like protein 10
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
early nodulin-like protein 10 (ENODL10); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 15 (TAIR:AT4G31840.1); Has 1297 Blast hits to 1250 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1297; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JS3SeggNOG:ENOG4111AFFEMBL:AY140062EMBL:BT006551
EMBL:CP002688EnsemblPlants:AT5G57920EnsemblPlants:AT5G57920.1entrez:835903
Gene3D:2.60.40.420GeneID:835903GO:GO:0009055GO:GO:0046658
Gramene:AT5G57920.1hmmpanther:PTHR33021hmmpanther:PTHR33021:SF8HOGENOM:HOG000237627
InterPro:IPR003245InterPro:IPR008972KEGG:ath:AT5G57920OMA:DYERCDR
Pfam:PF02298Pfscan:PS51485PhylomeDB:Q8L6Z5ProDom:PD003122
PROSITE:PS51485Proteomes:UP000006548RefSeq:NP_200600.2SMR:Q8L6Z5
STRING:3702.AT5G57920.1SUPFAM:SSF49503TAIR:AT5G57920tair10-symbols:AtENODL10
tair10-symbols:ENODL10UniGene:At.29305UniProt:Q8L6Z5
Coordinates (TAIR10) chr5:+:23453634..23454256
Molecular Weight (calculated) 20344.50 Da
IEP (calculated) 8.48
GRAVY (calculated) -0.24
Length 182 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSVMMCCCL LLLFGLLSEG REILVGGKSN TWKAPESRDE TLNQWSGRTR FKIGDSLLWK YNAENDSVLQ VRQTDYERCD RSEPIRGYKD GHTNIELKRS
101: GPFYFISGEE GHCQRGEKLR VVVLSPNHNR SVVDAPAPVN IVLSPNYNRS VAAAPLNAHI MNKGSLNTAW SLLLLLPLGL LV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)