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AT5G57840.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.917
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : HXXXD-type acyl-transferase family protein
Curator
Summary (TAIR10)
encodes a protein whose sequence is similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase from Dianthus caryophyllus (gi:2239091)
Computational
Description (TAIR10)
HXXXD-type acyl-transferase family protein; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase (TAIR:AT5G48930.1); Has 2663 Blast hits to 2654 proteins in 130 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 49; Plants - 2608; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G57840-MONOMERDNASU:835894eggNOG:ENOG410JXE2eggNOG:ENOG411041Z
EMBL:AB013396EMBL:AF410317EMBL:AY149921EMBL:CP002688
EnsemblPlants:AT5G57840EnsemblPlants:AT5G57840.1entrez:835894Gene3D:3.30.559.10
GeneID:835894GO:GO:0050734Gramene:AT5G57840.1hmmpanther:PTHR31642
hmmpanther:PTHR31642:SF11HOGENOM:HOG000237412IntAct:Q9FJN0InterPro:IPR003480
InterPro:IPR023213KEGG:ath:AT5G57840ncoils:CoilOMA:GYIMEAW
Pfam:PF02458PhylomeDB:Q9FJN0Proteomes:UP000006548RefSeq:NP_200592.1
SMR:Q9FJN0STRING:3702.AT5G57840.1TAIR:AT5G57840UniGene:At.26522
UniProt:Q9FJN0
Coordinates (TAIR10) chr5:-:23432945..23435161
Molecular Weight (calculated) 49952.90 Da
IEP (calculated) 7.84
GRAVY (calculated) -0.23
Length 443 amino acids
Sequence (TAIR10)
(BLAST)
001: MKIRVKQATI VKPAEETPTH NLWLSNLDLI QVRLHMGTLY FYKPCSSSDR PNTQSLIEAL SKVLVFFYPA AGRLQKNTNG RLEVQCNGEG VLFVEAESDS
101: TVQDIGLLTQ SLDLSQLVPT VDYAGDISSY PLLLFQVTYF KCGTICVGSS IHHTFGEATS LGYIMEAWSL TARGLLVKLT PFLDRTVLHA RNPPSSVFPH
201: TEYQSPPFHN HPMKSLAYRS NPESDSAIAT LKLTRLQLKA LKARAEIADS KFSTYEVLVA HTWRCASFAN EDLSEEHSTR LHIIIDGRPR LQPKLPQGYI
301: GNTLFHARPV SPLGAFHRES FSETVERVHR EIRKMDNEYL RSAIDYLERH PDLDQLVPGE GNTIFSCAAN FCIVSLIKQT AYEMDFGWGK AYYKRASHLN
401: EGKGFVTGNP DEEGSMMLTM CLKKTQLSKF RKLFYEFLNV SAL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)