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AT5G57760.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.936
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 5 Blast hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JSX1eggNOG:ENOG41108EDEMBL:AB018118EMBL:AK175190EMBL:BT010527EMBL:CP002688EnsemblPlants:AT5G57760
EnsemblPlants:AT5G57760.1entrez:835884GeneID:835884Gramene:AT5G57760.1HOGENOM:HOG000152470KEGG:ath:AT5G57760OMA:FRETCMQ
Proteomes:UP000006548RefSeq:NP_200584.1STRING:3702.AT5G57760.1TAIR:AT5G57760UniGene:At.47214UniGene:At.70163UniProt:Q9FHG7
Coordinates (TAIR10) chr5:+:23400725..23400961
Molecular Weight (calculated) 9088.58 Da
IEP (calculated) 10.65
GRAVY (calculated) -0.45
Length 78 amino acids
Sequence (TAIR10)
(BLAST)
1: MKMVKCKKVR HRGRKGQKEK PKFRETCMQR NLGILRRIVP GCEEIEDEEA LFLKSIQHLL LLKSQVNLLK KLADVCGV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)