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AT5G57280.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family, methyltransferase, Williams-Beuren syndrome (InterPro:IPR022238), Methyltransferase type 11 (InterPro:IPR013216); Has 984 Blast hits to 969 proteins in 433 species: Archae - 16; Bacteria - 445; Metazoa - 145; Fungi - 145; Plants - 54; Viruses - 0; Other Eukaryotes - 179 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0500eggNOG:KOG1541EMBL:AB019233EMBL:AY065258EMBL:AY096365EMBL:CP002688EnsemblPlants:AT5G57280
EnsemblPlants:AT5G57280.1entrez:835833Gene3D:3.40.50.150GeneID:835833GO:GO:0005634GO:GO:0005730GO:GO:0006364
GO:GO:0008168Gramene:AT5G57280.1hmmpanther:PTHR12734hmmpanther:PTHR12734:SF0HOGENOM:HOG000111527InterPro:IPR013216InterPro:IPR022238
InterPro:IPR029063KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-
KEGG:00380+2.1.1.-KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-
KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-KEGG:00981+2.1.1.-KEGG:ath:AT5G57280KO:K19306
OMA:DSKYTARPfam:PF08241Pfam:PF12589PhylomeDB:Q9LVD0Proteomes:UP000006548RefSeq:NP_200538.1SMR:Q9LVD0
STRING:3702.AT5G57280.1SUPFAM:SSF53335TAIR:AT5G57280UniGene:At.28542UniProt:Q9LVD0
Coordinates (TAIR10) chr5:+:23204533..23206485
Molecular Weight (calculated) 32388.30 Da
IEP (calculated) 8.21
GRAVY (calculated) -0.60
Length 289 amino acids
Sequence (TAIR10)
(BLAST)
001: MSNRPELLAP PEIFYDDTEA RKYTSSSRIV EIQAKLSERA LELLALPEDG VPRFLLDIGC GSGLSGETLS EDGHHWIGLD ISASMLHVAV EREVEGDLLL
101: GDMGQGLGLR SGVIDGAISI SAVQWLCNAD KSSHEPRLRL KAFFGSLYRC LSRGARAVFQ VYPENIAQRE LILRQALQAG FGGGLVVDYP HSTKKRKEFL
201: VLTCGTVQTS IQTSKNEYDE SCSEDDNSDD EESEEVGVSD RNRPRKRQRT NTKVKGREWV LRKKEQSRRK GKNVPADSKF TSRKRRTRF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)