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AT5G57050.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.992
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein phosphatase 2C family protein
Curator
Summary (TAIR10)
Encodes a protein phosphatase 2C and is involved in ABA signal transduction. Binds fibrillin preprotein in vitro and in vivo.
Computational
Description (TAIR10)
ABA INSENSITIVE 2 (ABI2); CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G26080.1); Has 6785 Blast hits to 6667 proteins in 423 species: Archae - 6; Bacteria - 246; Metazoa - 1749; Fungi - 768; Plants - 2698; Viruses - 7; Other Eukaryotes - 1311 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G57050-MONOMERBioCyc:ARA:GQT-1437-MONOMERBioGrid:21053DIP:DIP-35025NEC:3.1.3.16eggNOG:COG0631eggNOG:KOG0698
EMBL:AB024035EMBL:AY136415EMBL:BT008860EMBL:CP002688EMBL:Y08965EMBL:Y08966EMBL:Y11840
EnsemblPlants:AT5G57050EnsemblPlants:AT5G57050.1entrez:835809EvolutionaryTrace:O04719Gene3D:3.60.40.10GeneID:835809Genevisible:O04719
GO:GO:0004722GO:GO:0006469GO:GO:0006970GO:GO:0009408GO:GO:0009414GO:GO:0009737GO:GO:0009738
GO:GO:0010205GO:GO:0046872GO:GO:1902456hmmpanther:PTHR13832hmmpanther:PTHR13832:SF335HOGENOM:HOG000233896InParanoid:O04719
IntAct:O04719InterPro:IPR000222InterPro:IPR001932InterPro:IPR015655iPTMnet:O04719KEGG:ath:AT5G57050KO:K14497
MINT:MINT-274841OMA:HKKNAMAPANTHER:PTHR13832PaxDb:O04719PDB:3NMVPDB:3UJKPDB:3UJL
PDBsum:3NMVPDBsum:3UJKPDBsum:3UJLPfam:O04719Pfam:PF00481Pfscan:PS51746PhylomeDB:O04719
PRIDE:O04719PRO:PR:O04719PROSITE:PS01032PROSITE:PS51746ProteinModelPortal:O04719Proteomes:UP000006548RefSeq:NP_001119448.1
RefSeq:NP_200515.1scanprosite:PS01032SMART:SM00332SMR:O04719STRING:3702.AT5G57050.1SUPFAM:SSF81606TAIR:AT5G57050
tair10-symbols:ABI2tair10-symbols:AtABI2UniGene:At.22051UniProt:O04719
Coordinates (TAIR10) chr5:+:23087720..23089303
Molecular Weight (calculated) 46308.90 Da
IEP (calculated) 6.26
GRAVY (calculated) -0.34
Length 423 amino acids
Sequence (TAIR10)
(BLAST)
001: MDEVSPAVAV PFRPFTDPHA GLRGYCNGES RVTLPESSCS GDGAMKDSSF EINTRQDSLT SSSSAMAGVD ISAGDEINGS DEFDPRSMNQ SEKKVLSRTE
101: SRSLFEFKCV PLYGVTSICG RRPEMEDSVS TIPRFLQVSS SSLLDGRVTN GFNPHLSAHF FGVYDGHGGS QVANYCRERM HLALTEEIVK EKPEFCDGDT
201: WQEKWKKALF NSFMRVDSEI ETVAHAPETV GSTSVVAVVF PTHIFVANCG DSRAVLCRGK TPLALSVDHK PDRDDEAARI EAAGGKVIRW NGARVFGVLA
301: MSRSIGDRYL KPSVIPDPEV TSVRRVKEDD CLILASDGLW DVMTNEEVCD LARKRILLWH KKNAMAGEAL LPAEKRGEGK DPAAMSAAEY LSKMALQKGS
401: KDNISVVVVD LKGIRKFKSK SLN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)