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AT5G57010.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.928
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : calmodulin-binding family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
calmodulin-binding family protein; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: calmodulin-binding family protein (TAIR:AT4G33050.3); Has 390 Blast hits to 271 proteins in 57 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 100; Plants - 264; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IJFQeggNOG:ENOG410XYNXEMBL:AB024035EMBL:BT029188EMBL:CP002688EnsemblPlants:AT5G57010EnsemblPlants:AT5G57010.1
entrez:835803GeneID:835803GO:GO:0005634GO:GO:0005737Gramene:AT5G57010.1HOGENOM:HOG000237977InParanoid:Q058N0
IntAct:Q058N0KEGG:ath:AT5G57010OMA:WKELELAPaxDb:Q058N0PhylomeDB:Q058N0PRIDE:Q058N0ProteinModelPortal:Q058N0
Proteomes:UP000006548RefSeq:NP_200511.1STRING:3702.AT5G57010.1TAIR:AT5G57010UniGene:At.29351UniProt:Q058N0
Coordinates (TAIR10) chr5:+:23068207..23070203
Molecular Weight (calculated) 56153.90 Da
IEP (calculated) 9.88
GRAVY (calculated) -0.68
Length 495 amino acids
Sequence (TAIR10)
(BLAST)
001: MALSFGYLQR DNSFKKDSQE CETPRIRKTP VNMYLEKTLS FKDLVDQRNN YRDGNCGVKT RKGINLKGPK PDNMILDRSL SFTSLVQVEN RGGEEEDERG
101: SSPKRRNRGN LTALSLPAPT PFWSPRPSTE LDAAAVTLQK VYKSYRTRRN LADCAVVVEE LWWKELELAK LEPNKTNDKP ESAVSRWARA GTKAAKVGKG
201: LLKDDKAQKL ALRHWLEAID PRHRYGHNLH LYYDVWSESE STQPFFFWLD IGDGKEVNLN KCSRTLLQRQ CITYLGPKER QAYEVVVEDG KLVSRQTKSL
301: VETTEGTKWI FVLSTTRKLY IGQKQKGRFQ HSSFLSGAAI TAAGRIVSHD GVVKAVWPYS GHYLPTEENF REFICFLREN HVNLTNVKMN AIDDDDHLVN
401: NDGSTKPSMM VAKSDGSDEQ KRFSCKWSTG NGPRIGCVRD YPMDLQTRAL EQVNLSPRVV NGTMGLFGPI PSPRPSPKIR VSPRLSCMGL PSPRH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)