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AT5G56760.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : serine acetyltransferase 1;1
Curator
Summary (TAIR10)
Encodes a cytosolic serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system.
Computational
Description (TAIR10)
serine acetyltransferase 1;1 (SERAT1;1); FUNCTIONS IN: serine O-acetyltransferase activity; INVOLVED IN: cysteine biosynthetic process from serine; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Hexapeptide transferase, conserved site (InterPro:IPR018357), Serine O-acetyltransferase (InterPro:IPR005881), Trimeric LpxA-like (InterPro:IPR011004), Bacterial transferase hexapeptide repeat (InterPro:IPR001451), Serine acetyltransferase, N-terminal (InterPro:IPR010493); BEST Arabidopsis thaliana protein match is: serine acetyltransferase 2;2 (TAIR:AT3G13110.1); Has 18874 Blast hits to 18857 proteins in 2524 species: Archae - 292; Bacteria - 13784; Metazoa - 5; Fungi - 219; Plants - 250; Viruses - 18; Other Eukaryotes - 4306 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G56760-MONOMERBioCyc:MetaCyc:AT5G56760-MONOMERBioGrid:21022BRENDA:2.3.1.30EC:2.3.1.30eggNOG:COG1045eggNOG:ENOG410INAF
EMBL:AB013392EMBL:AK227979EMBL:AY039612EMBL:AY084861EMBL:AY133674EMBL:CP002688EMBL:U30298
EnsemblPlants:AT5G56760EnsemblPlants:AT5G56760.1entrez:835778GeneID:835778Genevisible:Q42538GO:GO:0005829GO:GO:0006535
GO:GO:0009001Gramene:AT5G56760.1gramene_pathway:2.3.1.30gramene_pathway:CYSTSYN-PWYgramene_plant_reactome:1119331gramene_plant_reactome:6874904hmmpanther:PTHR23416
hmmpanther:PTHR23416:SF2HOGENOM:HOG000049437InParanoid:Q42538IntAct:Q42538InterPro:IPR001451InterPro:IPR005881InterPro:IPR010493
InterPro:IPR011004InterPro:IPR018357iPTMnet:Q42538KEGG:00270+2.3.1.30KEGG:00920+2.3.1.30KEGG:ath:AT5G56760KO:K00640
OMA:TIHDEECPaxDb:Q42538Pfam:PF00132Pfam:PF06426Pfam:Q42538PhylomeDB:Q42538PIR:S71207
PRIDE:Q42538PRO:PR:Q42538PROSITE:PS00101ProteinModelPortal:Q42538Proteomes:UP000006548RefSeq:NP_200487.1scanprosite:PS00101
SMART:SM00971SMR:Q42538STRING:3702.AT5G56760.1SUPFAM:SSF51161TAIR:AT5G56760tair10-symbols:ATSERAT1;1tair10-symbols:SAT-52
tair10-symbols:SAT5tair10-symbols:SERAT1;1TIGRfam:TIGR01172TIGRFAMs:TIGR01172UniGene:At.23802UniPathway:UPA00136UniProt:Q42538
Coordinates (TAIR10) chr5:-:22961498..22962582
Molecular Weight (calculated) 32772.10 Da
IEP (calculated) 7.19
GRAVY (calculated) 0.04
Length 312 amino acids
Sequence (TAIR10)
(BLAST)
001: MPPAGELRHQ SPSKEKLSSV TQSDEAEAAS AAISAAAADA EAAGLWTQIK AEARRDAEAE PALASYLYST ILSHSSLERS ISFHLGNKLC SSTLLSTLLY
101: DLFLNTFSSD PSLRNATVAD LRAARVRDPA CISFSHCLLN YKGFLAIQAH RVSHKLWTQS RKPLALALHS RISDVFAVDI HPAAKIGKGI LLDHATGVVV
201: GETAVIGNNV SILHHVTLGG TGKACGDRHP KIGDGCLIGA GATILGNVKI GAGAKVGAGS VVLIDVPCRG TAVGNPARLV GGKEKPTIHD EECPGESMDH
301: TSFISEWSDY II
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)