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AT5G56580.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:20802223 (2010): cytosol cell plate
FP Images

7-day old Arabidopsis seedling (no marker)

RFP-At5g56580
(full-length)
overlay

SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : MAP kinase kinase 6
Curator
Summary (TAIR10)
Encodes a member of the MAP Kinase Kinase family of proteins. It can phosphorylate MPK12 in vitro and it can be dephosphorylated by MKP2 in vitro.
Computational
Description (TAIR10)
MAP kinase kinase 6 (MKK6); FUNCTIONS IN: MAP kinase kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: MAP kinase kinase 2 (TAIR:AT4G29810.1); Has 125172 Blast hits to 123800 proteins in 4446 species: Archae - 151; Bacteria - 14363; Metazoa - 46867; Fungi - 12279; Plants - 30893; Viruses - 513; Other Eukaryotes - 20106 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G56580-MONOMERBioGrid:21003EC:2.7.12.2eggNOG:ENOG410XQ5AeggNOG:KOG0581EMBL:AB013392EMBL:AB104460
EMBL:CP002688EnsemblPlants:AT5G56580EnsemblPlants:AT5G56580.1entrez:835759GeneID:835759Genevisible:Q9FJV0GO:GO:0000165
GO:GO:0000187GO:GO:0004674GO:GO:0004708GO:GO:0005524GO:GO:0005856GO:GO:0007112GO:GO:0007346
GO:GO:0009524GO:GO:0010311GO:GO:0031098Gramene:AT5G56580.1hmmpanther:PTHR24361hmmpanther:PTHR24361:SF336HOGENOM:HOG000234206
InParanoid:Q9FJV0IntAct:Q9FJV0InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441KEGG:ath:AT5G56580
KO:K04368MINT:MINT-1206105OMA:CKQVLLGPaxDb:Q9FJV0Pfam:PF00069Pfam:Q9FJV0Pfscan:PS50011
PhylomeDB:Q9FJV0PRIDE:Q9FJV0PRO:PR:Q9FJV0PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:Q9FJV0
Proteomes:UP000006548Reactome:R-ATH-110056Reactome:R-ATH-112411Reactome:R-ATH-2559580Reactome:R-ATH-445144Reactome:R-ATH-450302Reactome:R-ATH-450321
Reactome:R-ATH-5674135Reactome:R-ATH-5674499RefSeq:NP_200469.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:Q9FJV0
STRING:3702.AT5G56580.1SUPFAM:SSF56112TAIR:AT5G56580tair10-symbols:ANQ1tair10-symbols:ATMKK6tair10-symbols:MKK6UniGene:At.29375
UniProt:Q9FJV0
Coordinates (TAIR10) chr5:-:22904851..22906620
Molecular Weight (calculated) 39838.80 Da
IEP (calculated) 6.35
GRAVY (calculated) -0.17
Length 356 amino acids
Sequence (TAIR10)
(BLAST)
001: MVKIKSNLKQ LKLSVPAQES PISSFLTASG TFHDGDFLLN QKGLRLTSDE KQSRQSDSKE LDFEITAEDL ETVKVIGKGS GGVVQLVRHK WVGKFFAMKV
101: IQMNIQEEIR KQIVQELKIN QASSQCPHVV VCYHSFYHNG AFSLVLEYMD RGSLADVIRQ VKTILEPYLA VVCKQVLLGL VYLHNERHVI HRDIKPSNLL
201: VNHKGEVKIS DFGVSASLAS SMGQRDTFVG TYNYMSPERI SGSTYDYSSD IWSLGMSVLE CAIGRFPYLE SEDQQNPPSF YELLAAIVEN PPPTAPSDQF
301: SPEFCSFVSA CIQKDPPARA SSLDLLSHPF IKKFEDKDID LGILVGTLEP PVNYLR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)